RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ARMC4Q5T2S8 1044 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 CEP19Q96LK0 163 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 OR2A14Q96R47 310 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 ROGDIQ9GZN7 287 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 MAT2BQ9NZL9 334 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-201ENST00000342245 TEKT2Q9UIF3 430 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 TRHDEQ9UKU6 1024 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 USP22Q9UPT9 525 aa18.3■□□□□ 0.52
SMPD1-201ENST00000342245 H3BQ06 376 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 UBFD1O14562 309 aaKnown RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 PGLSO95336 258 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 FTH1P02794 183 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 MYCLP12524 364 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 FSHRP23945 695 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 ATICP31939 592 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 OR4D2P58180 307 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 JAG1P78504 1218 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 PAFAH1B3Q15102 231 aaKnown RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 AAK1Q2M2I8 961 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 ARMCX4Q5H9R4 360 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 NAPEPLDQ6IQ20 393 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 CAPN13Q6MZZ7 669 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 NECAB2Q7Z6G3 386 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 TMEM143Q96AN5 459 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 GPRASP2Q96D09 838 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 TSPAN17Q96FV3 270 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 SETD4Q9NVD3 440 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 TBC1D24Q9ULP9 559 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 GPR45Q9Y5Y3 372 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 DOCK5Q9H7D0 1870 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 SPATA31C2B4DYI2 1134 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 DSCR3O14972 297 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 EPN2O95208 641 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 EFNA1P20827 205 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 EFNA5P52803 228 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 TAS2R39P59534 338 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 YBX1P67809 324 aaKnown RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 NFKB2Q00653 900 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 RIPPLY1Q0D2K3 151 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 RAPSNQ13702 412 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 CSHL1Q14406 222 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 ZNF678Q5SXM1 525 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 KIAA0319Q5VV43 1072 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 SDE2Q6IQ49 451 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 SPESP1Q6UW49 350 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 SPATA6LQ8N4H0 392 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 KHSRPQ92945 711 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 PGLYRP2Q96PD5 576 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 PRDM12Q9H4Q4 367 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 RANGRFQ9HD47 186 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-201ENST00000342245 LTB4R2Q9NPC1 389 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 DPP3Q9NY33 737 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 TSPAN16Q9UKR8 245 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 TLR6Q9Y2C9 796 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 DNAJC15Q9Y5T4 150 aa18.29■□□□□ 0.52
SMPD1-201ENST00000342245 AP3D1O14617 1153 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 FAM20BO75063 409 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 SCNN1AP37088 669 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 TALDO1P37837 337 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 PLA2G4EQ3MJ16 856 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 EFL1Q7Z2Z2 1120 aaKnown RBP18.28■□□□□ 0.52
SMPD1-201ENST00000342245 TP53I13Q8NBR0 393 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-201ENST00000342245 OR52E4Q8NGH9 312 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 NSUN6Q8TEA1 469 aaKnown RBP18.28■□□□□ 0.52
SMPD1-201ENST00000342245 TWIST2Q8WVJ9 160 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 ISG20Q96AZ6 181 aaKnown RBP18.28■□□□□ 0.52
SMPD1-201ENST00000342245 SLC30A2Q9BRI3 323 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 SMPD4Q9NXE4 827 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 MFHAS1Q9Y4C4 1052 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 PCDHB14Q9Y5E9 798 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 PDHXO00330 501 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 SSX4O60224 188 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 HGFP14210 728 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 KCNA5P22460 613 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 PTPN3P26045 913 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 FMO3P31513 532 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 UQCRC1P31930 480 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 PIK3CBP42338 1070 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 NKX3-2P78367 333 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 TXNDC11Q6PKC3 985 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 SYVN1Q86TM6 617 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 DTWD1Q8N5C7 304 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 DEDD2Q8WXF8 326 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 SH3KBP1Q96B97 665 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 TUBGCP3Q96CW5 907 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 DPEP3Q9H4B8 488 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 ZNF304Q9HCX3 659 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 GLTPQ9NZD2 209 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 IPPQ9Y573 584 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 NRCAMQ92823 1304 aa18.28■□□□□ 0.52
SMPD1-201ENST00000342245 AZIN1O14977 448 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 NCAM2O15394 837 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 PRLP01236 227 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 PDGFAP04085 211 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 PSKH1P11801 424 aa18.27■□□□□ 0.52
SMPD1-201ENST00000342245 CYP3A5P20815 502 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms