RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 THAP4Q8WY91 577 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 ZNF514Q96K75 400 aaPredicted RBP15.29■□□□□ 0.04
LINC01116-202ENST00000339037 RUFY1Q96T51 708 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 CD180Q99467 661 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 MAP3K3Q99759 626 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 TRABDQ9H4I3 376 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 FGF21Q9NSA1 209 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 SPTLC3Q9NUV7 552 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 IMP3Q9NV31 184 aaKnown RBP15.29■□□□□ 0.04
LINC01116-202ENST00000339037 PSMD13Q9UNM6 376 aa15.29■□□□□ 0.04
LINC01116-202ENST00000339037 CELSR2Q9HCU4 2923 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 TLCD2A6NGC4 264 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 MFAP3LO75121 409 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 CPNE3O75131 537 aaKnown RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 POP7O75817 140 aaKnown RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 KRT1P04264 644 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 TNNT3P45378 269 aaPredicted RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 CTSCP53634 463 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 RPS18P62269 152 aaKnown RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 RPS15P62841 145 aaKnown RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 HSD11B2P80365 405 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 PDE1BQ01064 536 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 RPE65Q16518 533 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 PPP2R5EQ16537 467 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 UGT8Q16880 541 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 ODF2Q5BJF6 829 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 LDLRAP1Q5SW96 308 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 CPZQ66K79 652 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 FAM199XQ6PEV8 388 aaPredicted RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 FAM83HQ6ZRV2 1179 aaPredicted RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 B4GALNT4Q76KP1 1039 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 SYVN1Q86TM6 617 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 RFX6Q8HWS3 928 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 RASGEF1AQ8N9B8 481 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 GALNT11Q8NCW6 608 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 RNF214Q8ND24 703 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 SLC35G2Q8TBE7 412 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 TEKT5Q96M29 485 aa15.28■□□□□ 0.04
LINC01116-202ENST00000339037 AKIRIN1Q9H9L7 192 aaPredicted RBP15.28■□□□□ 0.04
LINC01116-202ENST00000339037 UBA6A0AVT1 1052 aaPredicted RBP15.27■□□□□ 0.04
LINC01116-202ENST00000339037 OR5K3A6NET4 321 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 OR2AG2A6NM03 316 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 GPR39O43194 453 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 AGFG2O95081 481 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 MTHFD1P11586 935 aaKnown RBP15.27■□□□□ 0.04
LINC01116-202ENST00000339037 PTPN3P26045 913 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 SPAM1P38567 509 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 WNT3AP56704 352 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 TUBB4BP68371 445 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 CHAF1BQ13112 559 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 TUBB2AQ13885 445 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 NFE2L1Q14494 772 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 NOMO1Q15155 1222 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 FAM151BQ6UXP7 276 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 CERS6Q6ZMG9 384 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 TTC30BQ8N4P2 665 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 DDHD1Q8NEL9 900 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 CPT1CQ8TCG5 803 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 DTX3LQ8TDB6 740 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 SLC25A23Q9BV35 468 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 TUBB2BQ9BVA1 445 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 TSPY26PQ9H489 355 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 NHEJ1Q9H9Q4 299 aaPredicted RBP15.27■□□□□ 0.04
LINC01116-202ENST00000339037 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.04
LINC01116-202ENST00000339037 HRASLS2Q9NWW9 162 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC01116-202ENST00000339037 FAM153AQ9UHL3 310 aa15.27■□□□□ 0.04
LINC01116-202ENST00000339037 LRBAP50851 2863 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 DOPEY1Q5JWR5 2465 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 GLYATL1P3A0A0U1RQE8 302 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 LOC285095A0A1B0GVY8 99 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 UGT1A9O60656 530 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 SCRG1O75711 98 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 UGT1A6P19224 532 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 UGT1A1P22309 533 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 UGT1A4P22310 534 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 GNLYP22749 145 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 ARHGAP25P42331 645 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 NR2C2P49116 596 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 XRCC4Q13426 336 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 IL10RAQ13651 578 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 ITGA9Q13797 1035 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 PRKD1Q15139 912 aaPredicted RBP15.26■□□□□ 0.03
LINC01116-202ENST00000339037 CHRNA6Q15825 494 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 SIRPB2Q5JXA9 342 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 GPRC6AQ5T6X5 926 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 FHL5Q5TD97 284 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 LRRC38Q5VT99 294 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 CAPRIN2Q6IMN6 1127 aaKnown RBP15.26■□□□□ 0.03
LINC01116-202ENST00000339037 TMEM220Q6QAJ8 160 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 GLT6D1Q7Z4J2 308 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 OOSP2Q86WS3 158 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 TMEM126BQ8IUX1 230 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 D2HGDHQ8N465 521 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 BLOC1S5Q8TDH9 187 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 MR1Q95460 341 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 ING2Q9H160 280 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 UGT1A7Q9HAW7 530 aa15.26■□□□□ 0.03
LINC01116-202ENST00000339037 UGT1A10Q9HAW8 530 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms