RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CLDN25C9JDP6 229 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 ANGPT2O15123 496 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 ABCB7O75027 752 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 CHRM3P20309 590 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
PSPC1-201ENST00000338910 PLD1Q13393 1074 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 LDLRAP1Q5SW96 308 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 RNF135Q8IUD6 432 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 TBC1D21Q8IYX1 336 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 STARD8Q92502 1023 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 WBP2Q969T9 261 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 LRRC58Q96CX6 371 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 MUS81Q96NY9 551 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 PDFQ9HBH1 243 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 PCDHA9Q9Y5H5 950 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 MIA3Q5JRA6 1907 aa18.55■□□□□ 0.56
PSPC1-201ENST00000338910 MROH6A6NGR9 719 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 STC2O76061 302 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 HOXD9P28356 352 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-201ENST00000338910 PLA2G16P53816 162 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 ZNF846Q147U1 533 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 SPATS1Q496A3 300 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 DEPDC1Q5TB30 811 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 TBPL2Q6SJ96 375 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 LEMD2Q8NC56 503 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 RPL10LQ96L21 214 aaKnown RBP18.54■□□□□ 0.56
PSPC1-201ENST00000338910 TRMOQ9BU70 441 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 MAGEH1Q9H213 219 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 ARL5AQ9Y689 179 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 H3BNC9 293 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 LDB2O43679 373 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 HPCAL1P37235 193 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 AQP6Q13520 282 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 C5orf22Q49AR2 442 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 AGAP9Q5VTM2 703 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 C16orf59Q7L2K0 433 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 OTOP2Q7RTS6 562 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 PTRH1Q86Y79 214 aaKnown RBP18.54■□□□□ 0.56
PSPC1-201ENST00000338910 CALML6Q8TD86 181 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 FKBP10Q96AY3 582 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 EXOC2Q96KP1 924 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 TRIM8Q9BZR9 551 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 SMPD4Q9NXE4 827 aa18.54■□□□□ 0.56
PSPC1-201ENST00000338910 JRKO75564 520 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 LDLRP01130 860 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 ALBP02768 609 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 SHMT2P34897 504 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 CDH4P55283 916 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 SPCS2Q15005 226 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 FBXO46Q6PJ61 603 aaPredicted RBP18.53■□□□□ 0.56
PSPC1-201ENST00000338910 SLC2A7Q6PXP3 512 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 SLC22A9Q8IVM8 553 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 TBATAQ96M53 351 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 CYP2S1Q96SQ9 504 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 SLC30A3Q99726 388 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 MUC13Q9H3R2 512 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 ANAPC2Q9UJX6 822 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 YIPF1Q9Y548 306 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 LTBP2Q14767 1821 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 C9JVG2 144 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 PAPSS2O95340 614 aaPredicted RBP18.53■□□□□ 0.56
PSPC1-201ENST00000338910 RBP1P09455 135 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 LTA4HP09960 611 aaKnown RBP18.53■□□□□ 0.56
PSPC1-201ENST00000338910 PABPC1P11940 636 aaKnown RBP18.53■□□□□ 0.56
PSPC1-201ENST00000338910 TSPAN8P19075 237 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 IMPDH1P20839 514 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 GSTM2P28161 218 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 LEPRP48357 1165 aaKnown RBP18.53■□□□□ 0.56
PSPC1-201ENST00000338910 GSK3BP49841 420 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 FOXM1Q08050 763 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 TPGS2Q68CL5 300 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 KIAA0408Q6ZU52 694 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 CILP2Q8IUL8 1156 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 TTC16Q8NEE8 873 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 TMEM125Q96AQ2 219 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 ERLEC1Q96DZ1 483 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 MAGED4Q96JG8 741 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 CEP295NLQ96MC4 621 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 SPG21Q9NZD8 308 aa18.53■□□□□ 0.56
PSPC1-201ENST00000338910 MARCH4Q9P2E8 410 aaPredicted RBP18.53■□□□□ 0.56
PSPC1-201ENST00000338910 DNMT3BQ9UBC3 853 aaKnown RBP18.53■□□□□ 0.56
PSPC1-201ENST00000338910 PRRG1O14668 218 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 SERPINF2P08697 491 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 UMPSP11172 480 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 RGRP47804 291 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 PYCR3Q53H96 274 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 MIER2Q8N344 545 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 OVCA2Q8WZ82 227 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 YME1L1Q96TA2 773 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 AKIP1Q9NQ31 210 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 SLC52A3Q9NQ40 469 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.52■□□□□ 0.56
PSPC1-201ENST00000338910 AGO1Q9UL18 857 aaKnown RBP18.52■□□□□ 0.56
PSPC1-201ENST00000338910 ST14Q9Y5Y6 855 aa18.52■□□□□ 0.56
PSPC1-201ENST00000338910 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.52■□□□□ 0.55
PSPC1-201ENST00000338910 CBX4O00257 560 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 SLC7A4O43246 635 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 KDM1AO60341 852 aa18.52■□□□□ 0.55
PSPC1-201ENST00000338910 BCAS1O75363 584 aaPredicted RBP18.52■□□□□ 0.55
PSPC1-201ENST00000338910 MT-ND1P03886 318 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms