RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 TUBGCP5Q96RT8 1024 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 IMP3Q9NV31 184 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 WDR37Q9Y2I8 494 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 RPH3AQ9Y2J0 694 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 DIP2BQ9P265 1576 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 CYB5AP00167 134 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 ANXA4P09525 319 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 LRRC70Q7Z2Q7 622 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 SPPL2CQ8IUH8 684 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 SNIP1Q8TAD8 396 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 DNASE1L2Q92874 299 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 TCF25Q9BQ70 676 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 PACSIN3Q9UKS6 424 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 KCNIP3Q9Y2W7 256 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 CILPO75339 1184 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 VIPP01282 170 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 CD2P06729 351 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 ECHS1P30084 290 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 PBX3P40426 434 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 CLCQ05315 142 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 HEPACAMQ14CZ8 416 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 SF1Q15637 639 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 CERCAMQ5T4B2 595 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 GALNT7Q86SF2 657 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 TRIM74Q86UV6 250 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 CMTR2Q8IYT2 770 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 OR2L5Q8NG80 312 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 DCAKDQ8WVC6 231 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 LPGAT1Q92604 370 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 PRICKLE1Q96MT3 831 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 AGAP2Q99490 1192 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 RAB11FIP5Q9BXF6 653 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 ST6GALNAC4Q9H4F1 302 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 ALG2Q9H553 416 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 ZSCAN5BA6NJL1 495 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 TAL1P17542 331 aaPredicted RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 L1CAMP32004 1257 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 HSD17B2P37059 387 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 LIN52Q52LA3 116 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 PDCD4Q53EL6 469 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 REP15Q6BDI9 236 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 GALNTL5Q7Z4T8 443 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 HDDC3Q8N4P3 179 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 NODALQ96S42 347 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 GPATCH1Q9BRR8 931 aaKnown RBP12.94□□□□□ -0.34
HLCS-201ENST00000336648 IPPKQ9H8X2 491 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 C14orf105Q9NVL8 296 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 DEC1Q9P2X7 70 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 HEBP2Q9Y5Z4 205 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 TLL2Q9Y6L7 1015 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
HLCS-201ENST00000336648 NOTOA8MTQ0 251 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 SNAPC5O75971 98 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 NOL4O94818 638 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 ESR1P03372 595 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 AKT2P31751 481 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CCNFP41002 786 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 NAT14Q8WUY8 206 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 XAGE5Q8WWM1 108 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 MECRQ9BV79 373 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 TOR3AQ9H497 397 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 IFT46Q9NQC8 304 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 ZNF639Q9UID6 485 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 M0R036 132 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 UBXN7O94888 489 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 ITGA7Q13683 1181 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 TARBP2Q15633 366 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 FAM189A2Q15884 450 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 ZNF548Q8NEK5 533 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 VANGL1Q8TAA9 524 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 POF1BQ8WVV4 589 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 FEM1CQ96JP0 617 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 NSMCE3Q96MG7 304 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 KLHL5Q96PQ7 755 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CLDN25C9JDP6 229 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 TGFB1I1O43294 461 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CAPN15O75808 1086 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CDK14O94921 469 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 PIRTP0C851 137 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 GABRR2P28476 465 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 RBM34P42696 430 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 IFI44LQ53G44 452 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 OGFRL1Q5TC84 451 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 IL23RQ5VWK5 629 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 PARGQ86W56 976 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CPNE9Q8IYJ1 553 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 OR5T3Q8NGG3 340 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CAMK1GQ96NX5 476 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 BRINP2Q9C0B6 783 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms