RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 SAMD15Q9P1V8 674 aa18.02■□□□□ 0.48
HLA-F-217ENST00000334668 MARCH4Q9P2E8 410 aaPredicted RBP18.02■□□□□ 0.48
HLA-F-217ENST00000334668 CDC23Q9UJX2 597 aa18.02■□□□□ 0.48
HLA-F-217ENST00000334668 ACSL5Q9ULC5 683 aa18.02■□□□□ 0.48
HLA-F-217ENST00000334668 PRSS21Q9Y6M0 314 aa18.02■□□□□ 0.48
HLA-F-217ENST00000334668 EPG5Q9HCE0 2579 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 ANKRD11Q6UB99 2663 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 ZCWPW2A0A1B0GU75 182 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 FAM187AA6NFU0 413 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 PDZK1P1A8MUH7 402 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 D6RAR5 112 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 QSOX1O00391 747 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 CD3EAPO15446 510 aaKnown RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 OR1I1O60431 355 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 SEC31AO94979 1220 aaKnown RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 VAPBO95292 243 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 CAPNS1P04632 268 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 CD1CP29017 333 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 PPARGP37231 505 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 DRG2P55039 364 aaKnown RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 OR1D5P58170 312 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 CLPPQ16740 277 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 ISXQ2M1V0 245 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 HIBCHQ6NVY1 386 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 ZNF454Q8N9F8 522 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 GPR150Q8NGU9 434 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 HM13Q8TCT9 377 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 SH3KBP1Q96B97 665 aa18.01■□□□□ 0.47
HLA-F-217ENST00000334668 FCRL3Q96P31 734 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-217ENST00000334668 IGHV1OR21-1A0A087WYE8 117 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 LILRA5A6NI73 299 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 KIF2AO00139 706 aaPredicted RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 ZW10O43264 779 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 CSO75390 466 aaKnown RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 USP1O94782 785 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 PBLDP30039 288 aaPredicted RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 TTPAP49638 278 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 GPLD1P80108 840 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 ZFP36L1Q07352 338 aaKnown RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 CBLBQ13191 982 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 SEPT7Q16181 437 aaKnown RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 MSS51Q4VC12 460 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 CASC4Q6P4E1 433 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 MAATS1Q7Z4T9 603 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 LILRA3Q8N6C8 439 aaPredicted RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 TRIM44Q96DX7 344 aaPredicted RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 SNF8Q96H20 258 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 TRIM56Q9BRZ2 755 aaKnown RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 NRSN2Q9GZP1 204 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 STN1Q9H668 368 aaKnown RBP18■□□□□ 0.47
HLA-F-217ENST00000334668 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 SLC40A1Q9NP59 571 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 POT1Q9NUX5 634 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 ENTPD2Q9Y5L3 495 aa18■□□□□ 0.47
HLA-F-217ENST00000334668 OR52A4PA6NMU1 304 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 EFCAB8A8MWE9 144 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 RAD51CO43502 376 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 PAMP19021 973 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 ALDH4A1P30038 563 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 RPL21P46778 160 aaKnown RBP17.99■□□□□ 0.47
HLA-F-217ENST00000334668 ITGA8P53708 1063 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 EPHA4P54764 986 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 CFHR1Q03591 330 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 C2orf54Q08AI8 447 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 BIRC2Q13490 618 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 RPE65Q16518 533 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 TYSND1Q2T9J0 566 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 CAPRIN2Q6IMN6 1127 aaKnown RBP17.99■□□□□ 0.47
HLA-F-217ENST00000334668 TMEM26Q6ZUK4 368 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 TMPRSS9Q7Z410 1059 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 RBM12BQ8IXT5 1001 aaKnown RBP17.99■□□□□ 0.47
HLA-F-217ENST00000334668 SLC38A3Q99624 504 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 ERP44Q9BS26 406 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.99■□□□□ 0.47
HLA-F-217ENST00000334668 COG4Q9H9E3 785 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 ANAPC5Q9UJX4 755 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 ATXN7L1Q9ULK2 861 aaPredicted RBP17.99■□□□□ 0.47
HLA-F-217ENST00000334668 PCDHB1Q9Y5F3 818 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 RPS6KL1Q9Y6S9 549 aa17.99■□□□□ 0.47
HLA-F-217ENST00000334668 URB1O60287 2271 aaKnown RBP17.98■□□□□ 0.47
HLA-F-217ENST00000334668 AHCTF1Q8WYP5 2266 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 TRABD2BA6NFA1 517 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 PRMT5O14744 637 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-217ENST00000334668 CPNE6O95741 557 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 VIPP01282 170 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 OR56A5P0C7T3 313 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 RPS3P23396 243 aaKnown RBP eCLIP17.98■□□□□ 0.471e-9■□□□□ 10.3
HLA-F-217ENST00000334668 CCKBRP32239 447 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 HALP42357 657 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 CKAP4Q07065 602 aaKnown RBP17.98■□□□□ 0.47
HLA-F-217ENST00000334668 DHX9Q08211 1270 aaKnown RBP17.98■□□□□ 0.47
HLA-F-217ENST00000334668 RPA4Q13156 261 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 RTP5Q14D33 572 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 WHAMMP3Q1A5X7 153 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 DNAJC21Q5F1R6 531 aaKnown RBP17.98■□□□□ 0.47
HLA-F-217ENST00000334668 MRNIPQ6NTE8 343 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 UNQ6494/PRO21346Q6UXR6 183 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 B3GNT8Q7Z7M8 397 aa17.98■□□□□ 0.47
HLA-F-217ENST00000334668 LDB1Q86U70 411 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-217ENST00000334668 ZNF761Q86XN6 746 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms