RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 LMAN2Q12907 356 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 PTGR1Q14914 329 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 AP5B1Q2VPB7 878 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 MYLK3Q32MK0 819 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.65■□□□□ 0.58
RFTN1-201ENST00000334133 OGFOD2Q6N063 350 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 DNAJC14Q6Y2X3 702 aaPredicted RBP18.65■□□□□ 0.58
RFTN1-201ENST00000334133 ERMP1Q7Z2K6 904 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 IL21Q9HBE4 155 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 MAGEE1Q9HCI5 957 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 CCM2LQ9NUG4 571 aaPredicted RBP18.65■□□□□ 0.58
RFTN1-201ENST00000334133 HACD3Q9P035 362 aa18.65■□□□□ 0.58
RFTN1-201ENST00000334133 TAPBPO15533 448 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 ZNF7P17097 686 aaPredicted RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 PSMA4P25789 261 aaKnown RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 KRT80Q6KB66 452 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 CMTM8Q8IZV2 173 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 ZNF382Q96SR6 550 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 C1QTNF3Q9BXJ4 246 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 SLC2A11Q9BYW1 496 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 RNF208Q9H0X6 261 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 DUS2Q9NX74 493 aaKnown RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 FAM8A1Q9UBU6 413 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 OAZ3Q9UMX2 235 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 RNF103-CHMP3A0A140T963 221 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 VPS4BO75351 444 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 PSMA3P25788 255 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 RPL5P46777 297 aaKnown RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 OR4D2P58180 307 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 RPL26P61254 145 aaKnown RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 IRX1P78414 480 aaPredicted RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 DET1Q7L5Y6 550 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 MILR1Q7Z6M3 343 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 ADGRG5Q8IZF4 528 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 TMEM199Q8N511 208 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 CLHC1Q8NHS4 586 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 RIN3Q8TB24 985 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 ZNF558Q96NG5 402 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 NUSAP1Q9BXS6 441 aaKnown RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 RIC8BQ9NVN3 520 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 INTS6Q9UL03 887 aaKnown RBP18.64■□□□□ 0.57
RFTN1-201ENST00000334133 ANGPTL3Q9Y5C1 460 aa18.64■□□□□ 0.57
RFTN1-201ENST00000334133 A0A1W2PRU2 124 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 NPIPB15A6NHN6 443 aaPredicted RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 TRBC1P01850 177 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 S100BP04271 92 aaPredicted RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 HSD17B1P14061 328 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 SLC2A4P14672 509 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 HMOX2P30519 316 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 RPL38P63173 70 aaKnown RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 TPGS2Q68CL5 300 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 CWF19L1Q69YN2 538 aaKnown RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 AHI1Q8N157 1196 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 FAM47BQ8NA70 645 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 DCAF4L2Q8NA75 395 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 TRMT2BQ96GJ1 504 aaKnown RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 C2orf49Q9BVC5 232 aaPredicted RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 ACTL8Q9H568 366 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 MBD1Q9UIS9 605 aaPredicted RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 HSPA13P48723 471 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 INPP5AQ14642 412 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 RETSATQ6NUM9 610 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 SKA2Q8WVK7 121 aaPredicted RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 MRPL17Q9NRX2 175 aaKnown RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 WWOXQ9NZC7 414 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 NUDT4Q9NZJ9 180 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 ACTR3BQ9P1U1 418 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 KLQ9UEF7 1012 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 CD84Q9UIB8 345 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 GLYATL1P3A0A0U1RQE8 302 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 VILLO15195 856 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 IL10P22301 178 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 PABPC1LQ4VXU2 614 aaKnown RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 PRMT9Q6P2P2 845 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 CYP20A1Q6UW02 462 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 SLC39A11Q8N1S5 342 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 STK40Q8N2I9 435 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 GPR26Q8NDV2 337 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 ZFP28Q8NHY6 868 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 TMIGD2Q96BF3 282 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 VWCEQ96DN2 955 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 LEF1Q9UJU2 399 aaPredicted RBP18.63■□□□□ 0.57
RFTN1-201ENST00000334133 ATP11BQ9Y2G3 1177 aa18.63■□□□□ 0.57
RFTN1-201ENST00000334133 MICAL3Q7RTP6 2002 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 CXCL10P02778 98 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 ITGALP20701 1170 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 ROR2Q01974 943 aaKnown RBP18.62■□□□□ 0.57
RFTN1-201ENST00000334133 ADAMTSL2Q86TH1 951 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 UHRF1Q96T88 793 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-201ENST00000334133 RPF2Q9H7B2 306 aaKnown RBP18.62■□□□□ 0.57
RFTN1-201ENST00000334133 ARMC1Q9NVT9 282 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 RAD51BO15315 384 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 ZNF821O75541 412 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-201ENST00000334133 CHRM1P11229 460 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-201ENST00000334133 PCNAP12004 261 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 TRAF3Q13114 568 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 PRKG2Q13237 762 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 ARHGEF7Q14155 803 aa18.62■□□□□ 0.57
RFTN1-201ENST00000334133 PYCR3Q53H96 274 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms