RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 RNF11Q9Y3C5 154 aa8.9□□□□□ -0.99
COPB2-201ENST00000333188 HEPACAM2A8MVW5 462 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 KIAA0355O15063 1070 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 LINC01565O15544 149 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 MTHFD2P13995 350 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 OGNP20774 298 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 GRIA3P42263 894 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 GPR1P46091 355 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 KCNK10P57789 538 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 PTSQ03393 145 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 LCP2Q13094 533 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 RABL3Q5HYI8 236 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 TMEM220Q6QAJ8 160 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SNX20Q7Z614 316 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 OR4F6Q8NGB9 312 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 OR56A4Q8NGH8 313 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 OR2A12Q8NGT7 310 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 RDH11Q8TC12 318 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 PNPT1Q8TCS8 783 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 NCLNQ969V3 563 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 TMEM159Q96B96 161 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 PKD2L2Q9NZM6 624 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 VTI1BQ9UEU0 232 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SEC16AO15027 2179 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 PRRT4C9JH25 899 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SLC31A1O15431 190 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 H2AFYO75367 372 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 SNRPB2P08579 225 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 ANPEPP15144 967 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 NFKBIAP25963 317 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 PEX2P28328 305 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 GDI1P31150 447 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 RFC2P35250 354 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SLC34A1Q06495 639 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 FAM78AQ5JUQ0 283 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 IL23RQ5VWK5 629 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 ELMSAN1Q6PJG2 1045 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SUSD1Q6UWL2 747 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 LCA5Q86VQ0 697 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 PHC3Q8NDX5 983 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 KIAA1191Q96A73 305 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 NAF1Q96HR8 494 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 TRIM54Q9BYV2 358 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 ELOVL6Q9H5J4 265 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 MRM3Q9HC36 420 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 FNIP2Q9P278 1114 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 ERVW-1Q9UQF0 538 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 COL4A6Q14031 1691 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 ZNF236Q9UL36 1845 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 COL6A3P12111 3177 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SAC3D1A6NKF1 404 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 LOC730098B7Z3J9 87 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 H3BQ06 376 aaPredicted RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 K7ESM1 405 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SH3BP5O60239 455 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 KERAO60938 352 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 ESR1P03372 595 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 PCCBP05166 539 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 OR56A5P0C7T3 313 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 MTHFD1P11586 935 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 VCLP18206 1134 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 LBPP18428 481 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 DGKAP23743 735 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 POLR2LP62875 67 aaKnown RBP8.89□□□□□ -0.99
COPB2-201ENST00000333188 MS4A2Q01362 244 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 NAE1Q13564 534 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 GTF2H2Q13888 395 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 CAMK1Q14012 370 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 TTLL9Q3SXZ7 439 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 GRAMD4Q6IC98 578 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 TANGO2Q6ICL3 276 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 GTF2H2CQ6P1K8 395 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 LETMD1Q6P1Q0 360 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 LILRA6Q6PI73 481 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 TPRG1Q6ZUI0 275 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 NXPE1Q8N323 547 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 UCMAQ8WVF2 138 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 SELENOMQ8WWX9 145 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 PLEKHG4BQ96PX9 1271 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 COMMD8Q9NX08 183 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 DLGAP2Q9P1A6 1054 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 POLG2Q9UHN1 485 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 MED16Q9Y2X0 877 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 NDUFAF1Q9Y375 327 aa8.89□□□□□ -0.99
COPB2-201ENST00000333188 CAPN8A6NHC0 703 aa8.88□□□□□ -0.99
COPB2-201ENST00000333188 C16orf96A6NNT2 1141 aa8.88□□□□□ -0.99
COPB2-201ENST00000333188 TSPAN6O43657 245 aa8.88□□□□□ -0.99
COPB2-201ENST00000333188 RNASEH2AO75792 299 aaKnown RBP8.88□□□□□ -0.99
COPB2-201ENST00000333188 PAK4O96013 591 aaPredicted RBP8.88□□□□□ -0.99
COPB2-201ENST00000333188 AOC1P19801 751 aa8.88□□□□□ -0.99
COPB2-201ENST00000333188 MAGEA12P43365 314 aa8.88□□□□□ -0.99
COPB2-201ENST00000333188 BDKRB1P46663 353 aa8.88□□□□□ -0.99
COPB2-201ENST00000333188 ERVPABLB-1P60509 514 aa8.88□□□□□ -0.99
COPB2-201ENST00000333188 TIAL1Q01085 375 aaKnown RBP eCLIP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms