RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 TBKBP1A7MCY6 615 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ANKRD28O15084 1053 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 LSM1O15116 133 aaKnown RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 CLOCKO15516 846 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 B4GAT1O43505 415 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 FOXD2O60548 495 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 TM4SF4P48230 202 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 HSPA7P48741 367 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 CLCN4P51793 760 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ZXDBP98169 803 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 PRKG2Q13237 762 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 ZIK1Q3SY52 487 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 TMEM259Q4ZIN3 620 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 GLYATQ6IB77 296 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 FAM86B1Q8N7N1 296 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 B4GALNT2Q8NHY0 566 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 VN1R3Q9BXE9 311 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 NTN4Q9HB63 628 aa13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 POLR3HQ9Y535 204 aaPredicted RBP13.23□□□□□ -0.29
TUBA1B-201ENST00000332858 hCG_2014768A0A024R1R8 64 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 H0Y858 1186 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 FFAR3O14843 346 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 GPR42O15529 346 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 TCF3P15923 654 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 UGT1A1P22309 533 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 UGT1A4P22310 534 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 UGT1A3P35503 534 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 UGT1A5P35504 534 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 GRIK2Q13002 908 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 NR6A1Q15406 480 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 AP5B1Q2VPB7 878 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 CYP20A1Q6UW02 462 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 ANKS3Q6ZW76 656 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 CLVS1Q8IUQ0 354 aaPredicted RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 HID1Q8IV36 788 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 GAB3Q8WWW8 586 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 IPPKQ9H8X2 491 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 CARS2Q9HA77 564 aaKnown RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 LTB4R2Q9NPC1 389 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 TLR9Q9NR96 1032 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 ZIM2Q9NZV7 527 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 GAPDHSO14556 408 aaPredicted RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 TAPBPO15533 448 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 BMP10O95393 424 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 PTGER3P43115 390 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 STT3AP46977 705 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 TUBA4AP68366 448 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 PHKG1Q16816 387 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 TMTC4Q5T4D3 741 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 GPR63Q9BZJ6 419 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 UTS2RQ9UKP6 389 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 DHRS7Q9Y394 339 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 SMAD6O43541 496 aaKnown RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 ESR1P03372 595 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 ENO2P09104 434 aaPredicted RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 RPS9P46781 194 aaKnown RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 MRPL19P49406 292 aaKnown RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 EMP3P54852 163 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 EEFSECP57772 596 aaKnown RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 ILF2Q12905 390 aaKnown RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 TRAF3Q13114 568 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 GTF2H2Q13888 395 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 GTF2H2CQ6P1K8 395 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 FRA10AC1Q70Z53 315 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 PAPD5Q8NDF8 572 aaKnown RBP13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 LRRC3Q9BY71 257 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 IKZF5Q9H5V7 419 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 RIC8BQ9NVN3 520 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 VAPAQ9P0L0 249 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 COMMD10Q9Y6G5 202 aa13.22□□□□□ -0.29
TUBA1B-201ENST00000332858 H7C0S8 307 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 UPK1AO00322 258 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 PRMT5O14744 637 aaPredicted RBP13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 FFAR2O15552 330 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 FZD6O60353 706 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 TBL1XO60907 577 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 IST1P53990 364 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 HPCAP84074 193 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 HMGCS1Q01581 520 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 PLD1Q13393 1074 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 PMS2P3Q13401 168 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 MBOAT1Q6ZNC8 495 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 SERPINA9Q86WD7 417 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 GOLM1Q8NBJ4 401 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 SEPT8Q92599 483 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 FEM1AQ9BSK4 669 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 DCUN1D5Q9BTE7 237 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 PREBQ9HCU5 417 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 SMPD3Q9NY59 655 aaPredicted RBP13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 VPS9D1Q9Y2B5 631 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 CASP8AP2Q9UKL3 1982 aa13.21□□□□□ -0.29
TUBA1B-201ENST00000332858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 H0Y626 953 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 DFNA5O60443 496 aa13.21□□□□□ -0.3
TUBA1B-201ENST00000332858 HTR1EP28566 365 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms