RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 PRMT5O14744 637 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 PFDN6O15212 129 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 HYAL3O43820 417 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 BRAFP15056 766 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 HALP42357 657 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 EIF3BP55884 814 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 HHEXQ03014 270 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 KIR2DS5Q14953 304 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 FASTKD3Q14CZ7 662 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 DNTTIP2Q5QJE6 756 aaKnown RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 RNF187Q5TA31 235 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 METRNLQ641Q3 311 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 ABRAXAS1Q6UWZ7 409 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 WASH2PQ6VEQ5 465 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 UNC5AQ6ZN44 842 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 SLC9B2Q86UD5 537 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 CILP2Q8IUL8 1156 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 TRIM48Q8IWZ4 208 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 ZBED8Q8IZ13 594 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 LILRA3Q8N6C8 439 aaPredicted RBP15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 FBXO25Q8TCJ0 367 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 TCF12Q99081 682 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 COG4Q9H9E3 785 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 WASH6PQ9NQA3 447 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 CPNE7Q9UBL6 633 aa15.59■□□□□ 0.09
CCDC28A-201ENST00000332797 C17orf113A0A1B0GUU1 675 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 E7ESA3 106 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 CASC3O15234 703 aaKnown RBP15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 PPM1DO15297 605 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 F7P08709 466 aaPredicted RBP15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 GSTM1P09488 218 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 SLC35G4P0C7Q5 338 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 PNLIPP16233 465 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 ITGB6P18564 788 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 SLC1A2P43004 574 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 FASLGP48023 281 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 INSM1Q01101 510 aaPredicted RBP15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 GSTM4Q03013 218 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 CLCA4Q14CN2 919 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 SYTL3Q4VX76 610 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 HSP90AA5PQ58FG0 334 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 HES3Q5TGS1 186 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 PTRHD1Q6GMV3 140 aaKnown RBP15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 XKR5Q6UX68 686 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 ZDHHC24Q6UX98 284 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 ZNF438Q7Z4V0 828 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 SPRED1Q7Z699 444 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 ZNF761Q86XN6 746 aaPredicted RBP15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 DENND6AQ8IWF6 608 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 CALML6Q8TD86 181 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 ELMO1Q92556 727 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 LPGAT1Q92604 370 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 FAM167BQ9BTA0 163 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 TSSK1BQ9BXA7 367 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 WWP1Q9H0M0 922 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 P2RY12Q9H244 342 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 PLAC1Q9HBJ0 212 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 SARS2Q9NP81 518 aaKnown RBP15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 SAYSD1Q9NPB0 183 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 IARS2Q9NSE4 1012 aaKnown RBP15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 GNPTGQ9UJJ9 305 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 ACSL5Q9ULC5 683 aa15.58■□□□□ 0.08
CCDC28A-201ENST00000332797 SPEGQ15772 3267 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 IQCF5A8MTL0 148 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 ESPNB1AK53 854 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 ZNF500O60304 480 aaPredicted RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 VIPP01282 170 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 RPLP0P05388 317 aaKnown RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 ERVK-10P10266 1014 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 XRCC1P18887 633 aaPredicted RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 SPINK2P20155 84 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 ALDH4A1P30038 563 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 FMO4P31512 558 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 PREPP48147 710 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 OR1D5P58170 312 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 UBE2IP63279 158 aaKnown RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 CCL7P80098 99 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 CTBP1Q13363 440 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 BOP1Q14137 746 aaKnown RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 BRD3Q15059 726 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 ZNF658BQ4V348 819 aaPredicted RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 GLE1Q53GS7 698 aaKnown RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 STEAP4Q687X5 459 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 NAPRTQ6XQN6 538 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 CCDC25Q86WR0 208 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 LRRC6Q86X45 466 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 LMNTD2Q8IXW0 634 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 AVL9Q8NBF6 648 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 LKAAEAR1Q8TD35 194 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 CXorf40BQ96DE9 158 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 CERS2Q96G23 380 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 EPB41L5Q9HCM4 733 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 PPANQ9NQ55 473 aaKnown RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 FBXO6Q9NRD1 293 aaPredicted RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 INTS10Q9NVR2 710 aaKnown RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 ZNF624Q9P2J8 865 aaPredicted RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 DMGDHQ9UI17 866 aaKnown RBP15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 VPS9D1Q9Y2B5 631 aa15.57■□□□□ 0.08
CCDC28A-201ENST00000332797 CRYL1Q9Y2S2 319 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms