RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 FRMD8P1Q9BZ68 369 aaPredicted RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 TSGA10Q9BZW7 698 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 GBA3Q9H227 469 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 DPEP2Q9H4A9 486 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 PRORYQ9H606 182 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 STN1Q9H668 368 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 ARNT2Q9HBZ2 717 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 LRRC4CQ9HCJ2 640 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 TRIM39Q9HCM9 518 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 SARS2Q9NP81 518 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 MRPL40Q9NQ50 206 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 WASH6PQ9NQA3 447 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 SMOXQ9NWM0 555 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 PDP2Q9P2J9 529 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 LRIT1Q9P2V4 623 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 GULP1Q9UBP9 304 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 CNOT6Q9ULM6 557 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 AAR2Q9Y312 384 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 TTLL3Q9Y4R7 772 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 PCDHB1Q9Y5F3 818 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RNF215Q9Y6U7 377 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 ACACBO00763 2458 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 KNL1Q8NG31 2342 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 SPTBN2O15020 2390 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 TEX51A0A1B0GUA7 166 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 A6NCN8 305 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 LILRA5A6NI73 299 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 RHPN2P1A8MT19 583 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 FADS2P1A8MWK0 482 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 B4DGG1 531 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 KMOO15229 486 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 RPLP0P05388 317 aaKnown RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 PYGMP11217 842 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 PECAM1P16284 738 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 GNPDA1P46926 289 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 WNT3AP56704 352 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 GSDMDP57764 484 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 SEMG2Q02383 582 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 DMPKQ09013 629 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 ITGA9Q13797 1035 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 SLC1A5Q15758 541 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 AGAP9Q5VTM2 703 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 DENND2CQ68D51 928 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 WDR74Q6RFH5 385 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 RAD9BQ6WBX8 426 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 BNC2Q6ZN30 1099 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 ZNF662Q6ZS27 426 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 PIM3Q86V86 326 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 MARCH9Q86YJ5 346 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 CCDC50Q8IVM0 306 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 ZNF567Q8N184 647 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 TTC30BQ8N4P2 665 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 UBL4BQ8N7F7 174 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 GPR26Q8NDV2 337 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 OR4D9Q8NGE8 314 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 GLYATL1Q969I3 302 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 EID2BQ96D98 161 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 WDR89Q96FK6 387 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 ATXN7L3BQ96GX2 97 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 CMKLR1Q99788 373 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 OSBPL8Q9BZF1 889 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 GPR63Q9BZJ6 419 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 SPATS2LQ9NUQ6 558 aaKnown RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 AKAP7Q9P0M2 348 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 IL17CQ9P0M4 197 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 SIRPGQ9P1W8 387 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 KLHL8Q9P2G9 620 aaPredicted RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 AMFRQ9UKV5 643 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 SATB2Q9UPW6 733 aa6.25□□□□□ -1.41
SMG1-201ENST00000330588 REXO2Q9Y3B8 237 aaKnown RBP6.25□□□□□ -1.41
SMG1-201ENST00000330588 IGHV1OR21-1A0A087WYE8 117 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 A0A1W2PNU3 283 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 GRID2IPA4D2P6 1211 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 GOLGA6CA6NDK9 693 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 GOLGA6BA6NDN3 693 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 GOLGA6L9A6NEM1 432 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 C5orf60A6NFR6 353 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 TOX3O15405 576 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 PSMD3O43242 534 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 GRID2O43424 1007 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 SLC25A14O95258 325 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 MT-CYBP00156 380 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 GOLGA6DP0CG33 693 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 F3P13726 295 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 BPIP17213 487 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 XRCC1P18887 633 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 ADRA1AP35348 466 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 ACTR1BP42025 376 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 MARCKSL1P49006 195 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 LIMK2P53671 638 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 CLDN6P56747 220 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 TMPRSS3P57727 454 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 ACTR1AP61163 376 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 DYNLT1P63172 113 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 TLE3Q04726 772 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 ADCY2Q08462 1091 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms