RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PLIN3O60664 434 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 HAUS5O94927 633 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 SNUPNO95149 360 aaKnown RBP16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 CYP2A6P11509 494 aaPredicted RBP16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 ZNF30P17039 623 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 GRK2P25098 689 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 CCT8P50990 548 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 CACNG1Q06432 222 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 ASPHQ12797 758 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 EIF2B5Q13144 721 aaKnown RBP16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 ITIH4Q14624 930 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 INPP5AQ14642 412 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 GPR33Q49SQ1 333 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 NUDCD3Q8IVD9 361 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 CACNA2D3Q8IZS8 1091 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 OR13C4Q8NGS5 318 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 BAHD1Q8TBE0 780 aaPredicted RBP16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 SKA1Q96BD8 255 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 ELMO2Q96JJ3 720 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 COQ10AQ96MF6 247 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 TCEAL2Q9H3H9 227 aaPredicted RBP16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 SIRPGQ9P1W8 387 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC17A6Q9P2U8 582 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 OR1A2Q9Y585 309 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 PCDHGB2Q9Y5G2 931 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 CELSR3Q9NYQ7 3312 aa16.23■□□□□ 0.19
PDLIM1-201ENST00000329399 SPTY2D1-AS1A0A0U1RR47 76 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 RGSL1A5PLK6 1076 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 LZTS3O60299 673 aaPredicted RBP16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 NDUFS3O75489 264 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 TGDSO95455 350 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 BPGMP07738 259 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 EPHA8P29322 1005 aaPredicted RBP16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 ALDH3A1P30838 453 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 FOXN2P32314 431 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 MPP1Q00013 466 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 PTSQ03393 145 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 FAM83EQ2M2I3 478 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 AGAP9Q5VTM2 703 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 KLC3Q6P597 504 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 CRTC1Q6UUV9 634 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 TBC1D1Q86TI0 1168 aaPredicted RBP16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 SLCO6A1Q86UG4 719 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 PNPLA1Q8N8W4 532 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 ZNF398Q8TD17 642 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 RHBDD1Q8TEB9 315 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 CCDC68Q9H2F9 335 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 MLXIPLQ9NP71 852 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 KCTD3Q9Y597 815 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC30A1Q9Y6M5 507 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 BPTFQ12830 3046 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 EDF1O60869 148 aaKnown RBP16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 KLHL2O95198 593 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 PROCP04070 461 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 ELFN1P0C7U0 828 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 PIRTP0C851 137 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 GIMD1P0DJR0 217 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 VIPR1P32241 457 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 ETV3P41162 512 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 SIM1P81133 766 aaPredicted RBP16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 DMTNQ08495 405 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 AGERQ15109 404 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 TRIP6Q15654 476 aaKnown RBP16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 CDKN3Q16667 212 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 CDHR3Q6ZTQ4 885 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 Q6ZVL8 140 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 CCDC197Q8NCU1 140 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 DENND6BQ8NEG7 585 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 ARMC2Q8NEN0 867 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 EID2BQ96D98 161 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 LGR4Q9BXB1 951 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 FAM107BQ9H098 131 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 NMRAL1Q9HBL8 299 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 FBXO6Q9NRD1 293 aaPredicted RBP16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 TOR4AQ9NXH8 423 aa16.22■□□□□ 0.19
PDLIM1-201ENST00000329399 KNTC1P50748 2209 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 TRIM38O00635 465 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 SNX3O60493 162 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 PCCBP05166 539 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 PYGLP06737 847 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 ADRB1P08588 477 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 RBP1P09455 135 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC35E2BP0CK96 405 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 TROVE2P10155 538 aaKnown RBP eCLIP16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 DGKAP23743 735 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 SKIV2L2P42285 1042 aaKnown RBP16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 RABIFP47224 123 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 ACOX1Q15067 660 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 HECTD2Q5U5R9 776 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 UGT3A1Q6NUS8 523 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 CNSTQ6PJW8 725 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 CMC1Q7Z7K0 106 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 EID2Q8N6I1 236 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 GPATCH11Q8N954 259 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 CCDC63Q8NA47 563 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 CCDC126Q96EE4 140 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 SEC16BQ96JE7 1060 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 PLEKHG4BQ96PX9 1271 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 SYTL2Q9HCH5 934 aa16.21■□□□□ 0.19
PDLIM1-201ENST00000329399 DNAJC28Q9NX36 388 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms