RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CLK3P49761 638 aaKnown RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 SLC26A2P50443 739 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TIAL1Q01085 375 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TSPY1Q01534 308 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF33AQ06730 810 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 GBX1Q14549 363 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ZBTB6Q15916 424 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 BEND7Q8N7W2 519 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 PABPC5Q96DU9 382 aaKnown RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 MED30Q96HR3 178 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF560Q96MR9 790 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 TMEM209Q96SK2 561 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ATOH8Q96SQ7 321 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 ACTR8Q9H981 624 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 RNF19AQ9NV58 838 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 OR12D3Q9UGF7 316 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 NUDT5Q9UKK9 219 aa12.62□□□□□ -0.39
CCDC60-201ENST00000327554 CAB39Q9Y376 341 aaPredicted RBP12.62□□□□□ -0.39
CCDC60-201ENST00000327554 DFFAO00273 331 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PEX10O60683 326 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 MITFO75030 526 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ABCB1P08183 1280 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PFKLP17858 780 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 CCNCP24863 283 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PRDX3P30048 256 aaKnown RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 UGT2B10P36537 528 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 HTR3AP46098 478 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 TRAF3Q13114 568 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 BRMS1LQ5PSV4 323 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 SCIMPQ6UWF3 145 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 CATSPERGQ6ZRH7 1159 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 HCAR2Q8TDS4 363 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 EGLN2Q96KS0 407 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 FSD1LQ9BXM9 530 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 SEMA4BQ9NPR2 832 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 QPCTLQ9NXS2 382 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 MARCH4Q9P2E8 410 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 CRNNQ9UBG3 495 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 LIMD1Q9UGP4 676 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 GPSM3Q9Y4H4 160 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ANGPTL3Q9Y5C1 460 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 OR2A25A4D2G3 310 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 YJEFN3A6XGL0 299 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 HBP1O60381 514 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 HLA-DQB2P05538 268 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 LCKP06239 509 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ENDOUP21128 410 aaKnown RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 FDXRP22570 491 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 CXCR4P61073 352 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ERVK-8P63133 956 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 TUBA1BP68363 451 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 GALK2Q01415 458 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 MVKQ03426 396 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PRKCDQ05655 676 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 TPRG1LQ5T0D9 272 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PAQR9Q6ZVX9 377 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 TUBA1AQ71U36 451 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 DPP9Q86TI2 863 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ARHGAP12Q8IWW6 846 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PEX5LQ8IYB4 626 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 SYTL1Q8IYJ3 562 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 CHPFQ8IZ52 775 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 EID3Q8N140 333 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 NUDT8Q8WV74 236 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 SLC10A4Q96EP9 437 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 PDLIM5Q96HC4 596 aaKnown RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF599Q96NL3 588 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 C6orf62Q9GZU0 229 aaPredicted RBP12.61□□□□□ -0.39
CCDC60-201ENST00000327554 DDIT4Q9NX09 232 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ADPRHL2Q9NX46 363 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 ADGRE2Q9UHX3 823 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 DERAQ9Y315 318 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 MAU2Q9Y6X3 613 aa12.61□□□□□ -0.39
CCDC60-201ENST00000327554 MCM3APO60318 1980 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 LOC105371267A0A1B0GV96 52 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 EVPLLA8MZ36 301 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 CCL22O00626 93 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 RGS10O43665 173 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SLC4A1P02730 911 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 VTNP04004 478 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 NPR3P17342 541 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ALOX12P18054 663 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 RABGGTBP53611 331 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 GNG2P59768 71 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF45Q02386 682 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 PRKG2Q13237 762 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 SMN1Q16637 294 aaKnown RBP12.6□□□□□ -0.39
CCDC60-201ENST00000327554 RFX4Q33E94 735 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 FBXO48Q5FWF7 155 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 DCAF15Q66K64 600 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 ZNF549Q6P9A3 640 aa12.6□□□□□ -0.39
CCDC60-201ENST00000327554 C11orf74Q86VG3 221 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms