RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PRDM5Q9NQX1 630 aaPredicted RBP16.52■□□□□ 0.24
SSH1-201ENST00000326470 TMEM248Q9NWD8 314 aa16.52■□□□□ 0.24
SSH1-201ENST00000326470 PAK1IP1Q9NWT1 392 aaPredicted RBP16.52■□□□□ 0.24
SSH1-201ENST00000326470 DNMT3BQ9UBC3 853 aaKnown RBP16.52■□□□□ 0.24
SSH1-201ENST00000326470 RIMKLBQ9ULI2 386 aa16.52■□□□□ 0.24
SSH1-201ENST00000326470 NEUROG3Q9Y4Z2 214 aa16.52■□□□□ 0.24
SSH1-201ENST00000326470 PCNTO95613 3336 aa16.52■□□□□ 0.23
SSH1-201ENST00000326470 PLXNB2O15031 1838 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 LOC100130705A0A1B0GUX0 176 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 NPEPPSL1A6NEC2 478 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 CASTOR2A6NHX0 329 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 IFRD1O00458 451 aaPredicted RBP16.51■□□□□ 0.23
SSH1-201ENST00000326470 OR4F21O95013 312 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 FMO4P31512 558 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 LRRTM3Q86VH5 581 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 ZNF683Q8IZ20 524 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 OR7A2PQ8NGA2 310 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 SERPINB11Q96P15 392 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 ZYG11BQ9C0D3 744 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 ACTL8Q9H568 366 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 ATP13A3Q9H7F0 1226 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 PCDHGB1Q9Y5G3 927 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 PTGES3LE9PB15 166 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 BTN3A1O00481 513 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 TOR1BO14657 336 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 AXIN1O15169 862 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 SLC22A1O15245 554 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 KDM1AO60341 852 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 CCDC159P0C7I6 412 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 ZNF691Q5VV52 312 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 MFSD4AQ8N468 514 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 CDYL2Q8N8U2 506 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 OR2T12Q8NG77 320 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 FBXO30Q8TB52 745 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 CDKN2AIPNLQ96HQ2 116 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 SEMA3CQ99985 751 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 SLX1AQ9BQ83 275 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 NMUR1Q9HB89 426 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 FBXO8Q9NRD0 319 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 EVLQ9UI08 416 aaPredicted RBP16.51■□□□□ 0.23
SSH1-201ENST00000326470 C3orf18Q9UK00 162 aa16.51■□□□□ 0.23
SSH1-201ENST00000326470 GJB3O75712 270 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 GSTT2P0CG29 244 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 GSTT2BP0CG30 244 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 G6PDP11413 515 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 RPL9P32969 192 aaKnown RBP16.5■□□□□ 0.23
SSH1-201ENST00000326470 KPNA1P52294 538 aaPredicted RBP16.5■□□□□ 0.23
SSH1-201ENST00000326470 UPP1Q16831 310 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ALFQ53S48 1182 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ANKRD34AQ69YU3 496 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 DPP9Q86TI2 863 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 METTL23Q86XA0 190 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 NKAPQ8N5F7 415 aaKnown RBP16.5■□□□□ 0.23
SSH1-201ENST00000326470 FAR1Q8WVX9 515 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 SLC47A1Q96FL8 570 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ZNF382Q96SR6 550 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ADGRE2Q9UHX3 823 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 GLTPD2A6NH11 291 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 E2F3O00716 465 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 GNGT2O14610 69 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 TNFRSF10BO14763 440 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ANKRD28O15084 1053 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 GSTA4O15217 222 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 EPOP01588 193 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 PIRTP0C851 137 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 RYKP34925 604 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 DGKQP52824 942 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 EMX1Q04741 257 aaPredicted RBP16.5■□□□□ 0.23
SSH1-201ENST00000326470 LAPTM5Q13571 262 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 GALNT3Q14435 633 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ACOX1Q15067 660 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 CYP20A1Q6UW02 462 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 SPESP1Q6UW49 350 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 SNX29P2Q8IUI4 249 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 OR10T2Q8NGX3 314 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ZNF566Q969W8 418 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ESAMQ96AP7 390 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 GPR21Q99679 349 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 C17orf80Q9BSJ5 609 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 CCDC90BQ9GZT6 254 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 ACTR8Q9H981 624 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 NECTIN3Q9NQS3 549 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 LIMD1Q9UGP4 676 aa16.5■□□□□ 0.23
SSH1-201ENST00000326470 CHRNA1P02708 482 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 PBX3P40426 434 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 ERVPABLB-1P60509 514 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 DGUOKQ16854 277 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 ADPRMQ3LIE5 342 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 ZNF513Q8N8E2 541 aaPredicted RBP16.49■□□□□ 0.23
SSH1-201ENST00000326470 DCBLD1Q8N8Z6 715 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 ZNF548Q8NEK5 533 aaPredicted RBP16.49■□□□□ 0.23
SSH1-201ENST00000326470 GIPC2Q8TF65 315 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 GTF3C2Q8WUA4 911 aaPredicted RBP16.49■□□□□ 0.23
SSH1-201ENST00000326470 FBLIM1Q8WUP2 373 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 SLC39A13Q96H72 371 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 TINF2Q9BSI4 451 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 YIPF2Q9BWQ6 316 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 FAM105AQ9NUU6 356 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 VAPAQ9P0L0 249 aa16.49■□□□□ 0.23
SSH1-201ENST00000326470 EIF2B4Q9UI10 523 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms