RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CHST9Q7L1S5 443 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 CFAP52Q8N1V2 620 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 SFRP1Q8N474 314 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 C1orf50Q9BV19 199 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 MRPL9Q9BYD2 267 aaKnown RBP19.6■□□□□ 0.73
SOX2-201ENST00000325404 TRIM8Q9BZR9 551 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 DNMT3LQ9UJW3 386 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 FAF1Q9UNN5 650 aaPredicted RBP19.6■□□□□ 0.73
SOX2-201ENST00000325404 PCDHGA11Q9Y5H2 935 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 NCF1BA6NI72 391 aaPredicted RBP19.6■□□□□ 0.73
SOX2-201ENST00000325404 NCF1CA8MVU1 366 aaPredicted RBP19.6■□□□□ 0.73
SOX2-201ENST00000325404 ANKRD66B4E2M5 251 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 ANKRD28O15084 1053 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 SEC24DO94855 1032 aaPredicted RBP19.6■□□□□ 0.73
SOX2-201ENST00000325404 SNAP29O95721 258 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 ALBP02768 609 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 NCF1P14598 390 aaPredicted RBP19.6■□□□□ 0.73
SOX2-201ENST00000325404 HMOX2P30519 316 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 KCNQ1P51787 676 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 KLHL35Q6PF15 583 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 ANKRD33Q7Z3H0 272 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 ADAMTSL2Q86TH1 951 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 TTC30BQ8N4P2 665 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 CDYL2Q8N8U2 506 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 PDPRQ8NCN5 879 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 CGREF1Q99674 301 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 GORASP2Q9H8Y8 452 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 NTN4Q9HB63 628 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 FKBPLQ9UIM3 349 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 RAI2Q9Y5P3 530 aa19.6■□□□□ 0.73
SOX2-201ENST00000325404 ZFP37Q9Y6Q3 630 aaPredicted RBP19.6■□□□□ 0.73
SOX2-201ENST00000325404 ZFC3H1O60293 1989 aaKnown RBP19.59■□□□□ 0.73
SOX2-201ENST00000325404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.59■□□□□ 0.73
SOX2-201ENST00000325404 H3BMQ9 156 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 ANXA6P08133 673 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 SLC11A1P49279 550 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 CDKN1CP49918 316 aaPredicted RBP19.59■□□□□ 0.73
SOX2-201ENST00000325404 TUBA3CQ13748 450 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 FAM98BQ52LJ0 330 aaKnown RBP19.59■□□□□ 0.73
SOX2-201ENST00000325404 ZNF773Q6PK81 442 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 OR52E4Q8NGH9 312 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 RNF145Q96MT1 663 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 COG8Q96MW5 612 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 GPR62Q9BZJ7 368 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 P2RY12Q9H244 342 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 POLR1BQ9H9Y6 1135 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 CDC14AQ9UNH5 594 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 AP3M1Q9Y2T2 418 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 DHRS7Q9Y394 339 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 ZNF711Q9Y462 761 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 PCDHB1Q9Y5F3 818 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 GREB1Q4ZG55 1949 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 UPK1AO00322 258 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 STX7O15400 261 aaKnown RBP19.59■□□□□ 0.73
SOX2-201ENST00000325404 TBC1D4O60343 1298 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 PARNO95453 639 aaKnown RBP19.59■□□□□ 0.73
SOX2-201ENST00000325404 CXCL10P02778 98 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 GGT1P19440 569 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 GALK1P51570 392 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 CLCN7P51798 805 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 ARSFP54793 590 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 DAG1Q14118 895 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 FBXO48Q5FWF7 155 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 SLC2A7Q6PXP3 512 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 SLC39A5Q6ZMH5 540 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 KCTD8Q6ZWB6 473 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 LPCAT1Q8NF37 534 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 METTL6Q8TCB7 284 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 POP5Q969H6 163 aaKnown RBP19.59■□□□□ 0.73
SOX2-201ENST00000325404 VPS50Q96JG6 964 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 SPON2Q9BUD6 331 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 MARCH5Q9NX47 278 aa19.59■□□□□ 0.73
SOX2-201ENST00000325404 TBKBP1A7MCY6 615 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 LSM1O15116 133 aaKnown RBP19.58■□□□□ 0.73
SOX2-201ENST00000325404 ATP5C1P36542 298 aaKnown RBP19.58■□□□□ 0.73
SOX2-201ENST00000325404 CASP2P42575 452 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 EPS8Q12929 822 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 LETMD1Q6P1Q0 360 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 CYP20A1Q6UW02 462 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 SCIMPQ6UWF3 145 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 CRIPAKQ8N1N5 446 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 SEPHS2Q99611 448 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 ZBED2Q9BTP6 218 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 ACTL8Q9H568 366 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 SLC27A5Q9Y2P5 690 aa19.58■□□□□ 0.73
SOX2-201ENST00000325404 E5RI56 91 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 H0Y858 1186 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 OR1I1O60431 355 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 VNN2O95498 520 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 HOXB6P17509 224 aaKnown RBP19.58■□□□□ 0.72
SOX2-201ENST00000325404 TMBIM6P55061 237 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 FAM117BQ6P1L5 589 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 CPNE9Q8IYJ1 553 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 OFCC1Q8IZS5 231 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 DTWD1Q8N5C7 304 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 OR52B6Q8NGF0 335 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 AURKBQ96GD4 344 aaPredicted RBP19.58■□□□□ 0.72
SOX2-201ENST00000325404 PPP3R2Q96LZ3 170 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 UGT2B28Q9BY64 529 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 CWH43Q9H720 699 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms