RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 OCM2P0CE71 109 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 OCMP0CE72 109 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 CORO1AP31146 461 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC6A4P31645 630 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 RGS4P49798 205 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ARMC12Q5T9G4 340 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ANKRD34AQ69YU3 496 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 MBOAT1Q6ZNC8 495 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 TMCO5AQ8N6Q1 288 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 SOCS4Q8WXH5 440 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ITCHQ96J02 903 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 NPLQ9BXD5 320 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 INTS10Q9NVR2 710 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 CHCHD3Q9NX63 227 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 VPS9D1Q9Y2B5 631 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 PCDHA9Q9Y5H5 950 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 FAM234BA2RU67 622 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 H3BMQ9 156 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ALDH2P05091 517 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 CD247P20963 164 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ARSFP54793 590 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 GTF2H2Q13888 395 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 SIM2Q14190 667 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 NR1D2Q14995 579 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ABRAXAS2Q15018 415 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC36A3Q495N2 470 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 SPANXN4Q5MJ08 99 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 CCNYL2Q5T2Q4 361 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 BROXQ5VW32 411 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 GTF2H2CQ6P1K8 395 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 FAM117BQ6P1L5 589 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ENPP6Q6UWR7 440 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 LYSMD3Q7Z3D4 306 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 MRPL10Q7Z7H8 261 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 PACRGLQ8N7B6 248 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 FAM86B1Q8N7N1 296 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 PROKR1Q8TCW9 393 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 TRIB2Q92519 343 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ASIC4Q96FT7 647 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 COG8Q96MW5 612 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 HIPK3Q9H422 1215 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 PARVBQ9HBI1 364 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 FARSBQ9NSD9 589 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 OPTCQ9UBM4 332 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ZFC3H1O60293 1989 aaKnown RBP12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 PRMT5O14744 637 aaPredicted RBP12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 RAD51BO15315 384 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 NBNO60934 754 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 PSMD8P48556 350 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 HK3P52790 923 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 NFKB2Q00653 900 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 PLD1Q13393 1074 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 CDH18Q13634 790 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 CLLU1OSQ5K130 101 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 AFMIDQ63HM1 303 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 BORAQ6PGQ7 559 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC24A5Q71RS6 500 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 KRTCAP2Q8N6L1 136 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 PKMYT1Q99640 499 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 SEZ6LQ9BYH1 1024 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 TOR3AQ9H497 397 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 RIBC2Q9H4K1 309 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 NLE1Q9NVX2 485 aaPredicted RBP12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 AASSQ9UDR5 926 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 CIDEBQ9UHD4 219 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 MAGEL2Q9UJ55 1249 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 DNMT3LQ9UJW3 386 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 PLXNB2O15031 1838 aa12.71□□□□□ -0.38
HMGCS1-201ENST00000325110 A0A1W2PQ67 120 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 PRKD3O94806 890 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC25A14O95258 325 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 FKBP9O95302 570 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 MATN4O95460 622 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 MAPKAPK2P49137 400 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 TAF1AQ15573 450 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC14A2Q15849 920 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 CYBRD1Q53TN4 286 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 ACBD5Q5T8D3 534 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 TXNDC11Q6PKC3 985 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 FKBP9P1Q75LS8 142 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 GOLGA7Q7Z5G4 137 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 SAPCD2Q86UD0 394 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 RASAL3Q86YV0 1011 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 PHYKPLQ8IUZ5 450 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 BOCQ9BWV1 1114 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 ABCD2Q9UBJ2 740 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF225Q9UK10 706 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 ULK1O75385 1050 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 DIRAS1O95057 198 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 PRAMEF1O95521 474 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 RPS17P08708 135 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 EEFSECP57772 596 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 TIAL1Q01085 375 aaKnown RBP eCLIP12.7□□□□□ -0.382e-7■■■■■ 42.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms