RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 OR5K1Q8NHB7 308 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 IMP4Q96G21 291 aaKnown RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 B3GALT6Q96L58 329 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 CAB39Q9Y376 341 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-201ENST00000323668 GRB7Q14451 532 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 OGFOD2Q6N063 350 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 SERPINA9Q86WD7 417 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 HPS1Q92902 700 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 SUSD3Q96L08 255 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 TRPC4Q9UBN4 977 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 GTF2IRD1Q9UHL9 959 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 KLHL20Q9Y2M5 609 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 PCDHGA7Q9Y5G6 932 aa14.55□□□□□ -0.08
TCOF1-201ENST00000323668 FFAR2O15552 330 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 CNTN5O94779 1100 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 EPOP01588 193 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 PPP2R1BP30154 601 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 CYP4F2P78329 520 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 TRMT11Q7Z4G4 463 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 ANKFN1Q8N957 763 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 PROX1Q92786 737 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 EHD3Q9NZN3 535 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 NHSL1Q5SYE7 1610 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 BMP10O95393 424 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 PRPS2P11908 318 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 FKBP1BP68106 108 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 PDZK1Q5T2W1 519 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 TYW3Q6IPR3 259 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 MINDY1Q8N5J2 469 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 TTPALQ9BTX7 342 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 ZDHHC6Q9H6R6 413 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 HMX2A2RU54 273 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 TOR1BO14657 336 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 SYN3O14994 580 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 S1PR4O95977 384 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 SERPINA1P01009 418 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 VARSP26640 1264 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 AQP1P29972 269 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 ALDH3A2P51648 485 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 C1QTNF8P60827 252 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 RPS14P62263 151 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 PHF10Q8WUB8 498 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 KLHL32Q96NJ5 620 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 VPS35Q96QK1 796 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 FEM1AQ9BSK4 669 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 WDR6Q9NNW5 1121 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 GIMAP4Q9NUV9 329 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 POLR3BQ9NW08 1133 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 J3QRK9 145 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 PRKD3O94806 890 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 CYP2A6P11509 494 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 MOGQ16653 247 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 RANBP10Q6VN20 620 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 AHSA2Q719I0 299 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 EIF3MQ7L2H7 374 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 ZC3H7AQ8IWR0 971 aaKnown RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 GPR156Q8NFN8 814 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 FBXL8Q96CD0 374 aa14.54□□□□□ -0.08
TCOF1-201ENST00000323668 CRNNQ9UBG3 495 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-201ENST00000323668 LTBP3Q9NS15 1303 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ZNF99A8MXY4 864 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 GPR32O75388 356 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ENO2P09104 434 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 RPS24P62847 133 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 HMGCS1Q01581 520 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ALDH6A1Q02252 535 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 PPP1R8Q12972 351 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 MS4A13Q5J8X5 152 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 NANOGP8Q6NSW7 305 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 METTL3Q86U44 580 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 NSUN5Q96P11 429 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 NANOGQ9H9S0 305 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 CLN6Q9NWW5 311 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 EVLQ9UI08 416 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 NPPAP01160 153 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 FABP3P05413 133 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 CD1DP15813 335 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ARSFP54793 590 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 GALNT1Q10472 559 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ARHGAP15Q53QZ3 475 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 PM20D1Q6GTS8 502 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ZNF773Q6PK81 442 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 EGFL6Q8IUX8 553 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 GOLM1Q8NBJ4 401 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 RHEBL1Q8TAI7 183 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 POPDC3Q9HBV1 291 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 DNAJC15Q9Y5T4 150 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 COL4A1P02462 1669 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 DNAJC25-GNG10A0A024R161 153 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 MYL12BO14950 172 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 C7P10643 843 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 BMP2P12643 396 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 ITPKAP23677 461 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 WEE1P30291 646 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 PURAQ00577 322 aaKnown RBP14.53□□□□□ -0.08
TCOF1-201ENST00000323668 TP53BP2Q13625 1128 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 TCAIMQ8N3R3 496 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 C19orf18Q8NEA5 215 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 NPLOC4Q8TAT6 608 aa14.53□□□□□ -0.08
TCOF1-201ENST00000323668 PGAP3Q96FM1 320 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms