RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 UBAP2LQ14157 1087 aaKnown RBP12.9□□□□□ -0.34
CPNE1-201ENST00000317677 CSHL1Q14406 222 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 OXA1LQ15070 435 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 ARHGAP15Q53QZ3 475 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 TECRLQ5HYJ1 363 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 PSAPL1Q6NUJ1 521 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 HPS6Q86YV9 775 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 VN1R2Q8NFZ6 395 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 IRF7Q92985 503 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 SCYL1Q96KG9 808 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 UBXN10Q96LJ8 280 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 RILPQ96NA2 401 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 EBF4Q9BQW3 602 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 OSBPL11Q9BXB4 747 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 ADGRE3Q9BY15 652 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 MROQ9BYG7 248 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 EHD1Q9H4M9 534 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 FAM96AQ9H5X1 160 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 OLAHQ9NV23 265 aa12.9□□□□□ -0.34
CPNE1-201ENST00000317677 PRPF19Q9UMS4 504 aaKnown RBP12.9□□□□□ -0.34
CPNE1-201ENST00000317677 A0A087WXM4 84 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 MYOCOSA0A1B0GUC4 107 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 KRBA1A5PL33 1030 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 ANKRD34BA5PLL1 514 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 MEI4A8MW99 385 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 TRIM13O60858 407 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 XYLBO75191 536 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 CYBBP04839 570 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 KCNA5P22460 613 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 GRK2P25098 689 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 BMXP51813 675 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 NR1D2Q14995 579 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 CDKN3Q16667 212 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 LY6G5CQ5SRR4 150 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 OGFOD2Q6N063 350 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 AFTPHQ6ULP2 937 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 LYSMD3Q7Z3D4 306 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 C11orf74Q86VG3 221 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 CPSF7Q8N684 471 aaKnown RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 RDH11Q8TC12 318 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 LPGAT1Q92604 370 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 DLG3Q92796 817 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 CNDP2Q96KP4 475 aaKnown RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 ZNF597Q96LX8 424 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 BBS2Q9BXC9 721 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 SPHK2Q9NRA0 654 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 IL17CQ9P0M4 197 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 EBF1Q9UH73 591 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 HS3ST2Q9Y278 367 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 REV3LO60673 3130 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 PRSS51A0A1B0GVH4 220 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 NEMP2A6NFY4 417 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 C2orf81A6NN90 581 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 GAPDHSO14556 408 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 APOA4P06727 396 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 CHRNGP07510 517 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 POU2F2P09086 479 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 TYRP14679 529 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 TCF3P15923 654 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 ZNF26P17031 533 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 DCKP27707 260 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 GRIA4P48058 902 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 KCNC1P48547 511 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 SUOXP51687 545 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 ARMC12Q5T9G4 340 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 FAM45BPQ6NSW5 357 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 ADIPOR2Q86V24 386 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 CLVS1Q8IUQ0 354 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 DEFB107AQ8IZN7 70 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 TXNDC5Q8NBS9 432 aaKnown RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 FAM45AQ8TCE6 357 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 AARSD1Q9BTE6 412 aaKnown RBP12.89□□□□□ -0.35
CPNE1-201ENST00000317677 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 TMEM9Q9P0T7 183 aa12.89□□□□□ -0.35
CPNE1-201ENST00000317677 CENPBD1B2RD01 187 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 RGS13O14921 159 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 KMOO15229 486 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 SORBS2O94875 1100 aaKnown RBP12.88□□□□□ -0.35
CPNE1-201ENST00000317677 ALOX5P09917 674 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 JAK1P23458 1154 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 MC4RP32245 332 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 SLC12A2P55011 1212 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 LSM12Q3MHD2 195 aaKnown RBP12.88□□□□□ -0.35
CPNE1-201ENST00000317677 FAM209AQ5JX71 171 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 LIPMQ5VYY2 423 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 TTC23LQ6PF05 361 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 VASH1Q7L8A9 365 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-201ENST00000317677 MMAAQ8IVH4 418 aaKnown RBP12.88□□□□□ -0.35
CPNE1-201ENST00000317677 LSMEM2Q8N112 164 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 ZNF781Q8N8C0 355 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 OR2AP1Q8NGE2 309 aa12.88□□□□□ -0.35
CPNE1-201ENST00000317677 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms