RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 DHRS1Q96LJ7 313 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CDK5RAP1Q96SZ6 601 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 TKTL2Q9H0I9 626 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RPS6KA6Q9UK32 745 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 KLK4Q9Y5K2 254 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 PRR23AA6NEV1 266 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SUPT3HB4E1H0 165 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 DFFAO00273 331 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 UBFD1O14562 309 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 WISP3O95389 354 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 HTR1AP08908 422 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 MTHFD2P13995 350 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RPS5P46782 204 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RUNX1T1Q06455 604 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CXCL9Q07325 125 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ARMC4Q5T2S8 1044 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 DEPDC4Q8N2C3 294 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 UMODL1-AS1Q8N2C9 162 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SPATA22Q8NHS9 363 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CELF6Q96J87 481 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 C1orf109Q9NX04 203 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 RNF112Q9ULX5 631 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 TRAPPC4Q9Y296 219 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 METTL15A6NJ78 407 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 PSMD11O00231 422 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 TOR1BO14657 336 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 FAM20BO75063 409 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 RHOBTB1O94844 696 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 LINC00032P0C843 101 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 FCGRTP55899 365 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF280AP59817 542 aaPredicted RBP4.71□□□□□ -1.65
PTPN13-201ENST00000316707 DMPKQ09013 629 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 DGCR6Q14129 220 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 FAM182AQ5T1J6 154 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 CLEC20AQ6ZU45 233 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 ANGPTL6Q8NI99 470 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 SUN5Q8TC36 379 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 SLC47A1Q96FL8 570 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 SEMA4BQ9NPR2 832 aaPredicted RBP4.71□□□□□ -1.65
PTPN13-201ENST00000316707 INTS7Q9NVH2 962 aaKnown RBP4.71□□□□□ -1.65
PTPN13-201ENST00000316707 ADGRE2Q9UHX3 823 aa4.71□□□□□ -1.65
PTPN13-201ENST00000316707 FAM72CH0Y354 149 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 XYLBO75191 536 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ARHGEF15O94989 841 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 YES1P07947 543 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TCEA1P23193 301 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ETV6P41212 452 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PIK3CGP48736 1102 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SF3B4Q15427 424 aaKnown RBP eCLIP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 FAM72AQ5TYM5 149 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MLIPQ5VWP3 458 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 FAM72DQ6L9T8 149 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TBPL2Q6SJ96 375 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 KDELC1Q6UW63 502 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MSANTD1Q6ZTZ1 278 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 FAM72BQ86X60 149 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RTL3Q8N8U3 475 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF548Q8NEK5 533 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OR9Q1Q8NGQ5 310 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 FBXO30Q8TB52 745 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TRAPPC12Q8WVT3 735 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ISG20Q96AZ6 181 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 IMP4Q96G21 291 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CRELD1Q96HD1 420 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PPM1MQ96MI6 270 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 C6orf62Q9GZU0 229 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SLA2Q9H6Q3 261 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 EHD3Q9NZN3 535 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 GMPR2Q9P2T1 348 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RNF6Q9Y252 685 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 YJEFN3A6XGL0 299 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 XPNPEP2O43895 674 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 KLK8O60259 260 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TRIM3O75382 744 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MT-CYBP00156 380 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 FYNP06241 537 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ITGA2P17301 1181 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MAPK1P28482 360 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MAGEA2P43356 314 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 STC1P52823 247 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PITX1P78337 314 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CYP4F3Q08477 520 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 EIF4HQ15056 248 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TTLL9Q3SXZ7 439 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 NOL9Q5SY16 702 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 FAM182BQ5T319 152 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MFSD4BQ5TF39 518 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SHQ1Q6PI26 577 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CCDC81Q6ZN84 652 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RNF165Q6ZSG1 346 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TP53INP2Q8IXH6 220 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OR52K2Q8NGK3 314 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CEP295NLQ96MC4 621 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TMEM74Q96NL1 305 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 COL21A1Q96P44 957 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 AARSD1Q9BTE6 412 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DPY30Q9C005 99 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TNFRSF12AQ9NP84 129 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ACOT13Q9NPJ3 140 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms