RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 P3H4Q92791 437 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 TWSG1Q9GZX9 223 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 PDE7BQ9NP56 450 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 TLK1Q9UKI8 766 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 RARRES3Q9UL19 164 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 POLHQ9Y253 713 aa17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 DNMT3AQ9Y6K1 912 aaPredicted RBP17.07■□□□□ 0.32
EXOSC4-201ENST00000316052 hCG_1818297A0A087WSY0 165 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 PSTPIP1O43586 416 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 AGTP01019 485 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 NTRK1P04629 796 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 TPM1P09493 284 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 EBLN1P0CF75 366 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 MTHFD1P11586 935 aaKnown RBP17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 HLA-DPA1P20036 260 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 PBLDP30039 288 aaPredicted RBP17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 KLRB1Q12918 225 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 MPP3Q13368 585 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 TFDP3Q5H9I0 405 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 FNBP1LQ5T0N5 605 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 TCTN3Q6NUS6 607 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 FAM199XQ6PEV8 388 aaPredicted RBP17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 DET1Q7L5Y6 550 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 ZNF398Q8TD17 642 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 QKIQ96PU8 341 aaKnown RBP eCLIP17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 VAT1Q99536 393 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 GORASP1Q9BQQ3 440 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 ZCCHC2Q9C0B9 1178 aaKnown RBP17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 IMP3Q9NV31 184 aaKnown RBP17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 ANKMY1Q9P2S6 941 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 PKP3Q9Y446 797 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 ARL5AQ9Y689 179 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 TEX15Q9BXT5 2789 aa17.06■□□□□ 0.32
EXOSC4-201ENST00000316052 CLEC18AA5D8T8 446 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 MKRN2OSH3BPM6 223 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 RECKO95980 971 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 MT-ND3P03897 115 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 PDGFAP04085 211 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 PMS2P54278 862 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 HADHBP55084 474 aaKnown RBP17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 ITGA9Q13797 1035 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 PLCL1Q15111 1095 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 DUS1LQ6P1R4 473 aaKnown RBP17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 CLEC18BQ6UXF7 455 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 KATNAL2Q8IYT4 538 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 RCOR2Q8IZ40 523 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 CLEC18CQ8NCF0 446 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 FCRL4Q96PJ5 515 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 HEMGNQ9BXL5 484 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 WWP1Q9H0M0 922 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 ACTL8Q9H568 366 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 FGF21Q9NSA1 209 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 SMOXQ9NWM0 555 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 HRASLS2Q9NWW9 162 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 RSPH14Q9UHP6 348 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 TFR2Q9UP52 801 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 ICE1Q9Y2F5 2266 aa17.05■□□□□ 0.32
EXOSC4-201ENST00000316052 OR5K3A6NET4 321 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 MGAT4DA6NG13 374 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 C21orf140B9A014 251 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 STX7O15400 261 aaKnown RBP17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 SGTAO43765 313 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 RFPL1O75677 317 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 DNAJB5O75953 348 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 ZRANB2O95218 330 aaKnown RBP eCLIP17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 MSH3P20585 1137 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 TNNT3P45378 269 aaPredicted RBP17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 MLLT10P55197 1068 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 RPS18P62269 152 aaKnown RBP17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 TBX2Q13207 712 aaPredicted RBP17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 OLIG2Q13516 323 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 LONRF2Q1L5Z9 754 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 DNTTIP2Q5QJE6 756 aaKnown RBP17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 KLHL35Q6PF15 583 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 FBXO38Q6PIJ6 1188 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 ASB18Q6ZVZ8 466 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 D2HGDHQ8N465 521 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 KRT35Q92764 455 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 MIB2Q96AX9 1013 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 ZNF514Q96K75 400 aaPredicted RBP17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 PPM1MQ96MI6 270 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 FICDQ9BVA6 458 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 TRIM55Q9BYV6 548 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 TRHDEQ9UKU6 1024 aa17.04■□□□□ 0.32
EXOSC4-201ENST00000316052 UBA6A0AVT1 1052 aaPredicted RBP17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 OR6C74A6NCV1 312 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 TLCD2A6NGC4 264 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 HACD1B0YJ81 288 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 PRAMEF1O95521 474 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 RBL1P28749 1068 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 AKT1P31749 480 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 MAGEA1P43355 309 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 HSD11B2P80365 405 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 ACY1Q03154 408 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 XRCC4Q13426 336 aa17.03■□□□□ 0.32
EXOSC4-201ENST00000316052 SEMA5AQ13591 1074 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms