RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PPIL3Q9H2H8 161 aaKnown RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 RIOX1Q9H6W3 641 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 SELENONQ9NZV5 590 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 FBXW11Q9UKB1 542 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 EXO1Q9UQ84 846 aaKnown RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF148Q9UQR1 794 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 CCL27Q9Y4X3 112 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 THSD7AQ9UPZ6 1657 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF532Q9HCE3 1301 aa4.02□□□□□ -1.77
SMCO3-201ENST00000316048 MYH14Q7Z406 1995 aaKnown RBP4.02□□□□□ -1.77
SMCO3-201ENST00000316048 NHSQ6T4R5 1651 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 CGB1A6NKQ9 187 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 E5RJQ4 531 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 GPC4O75487 556 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 NDUFB8O95169 186 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 PRLRP16471 622 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 MUTP22033 750 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 CHATP28329 748 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TLX1P31314 330 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 MMP14P50281 582 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ZXDAP98168 799 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 DPTQ07507 201 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TRAF1Q13077 416 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 HNF4GQ14541 408 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ASIC2Q16515 512 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TCP11X2Q5H9J9 407 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF772Q68DY9 489 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 PLEKHA7Q6IQ23 1121 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ADIPOR2Q86V24 386 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 FOXRED2Q8IWF2 684 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 FBXL16Q8N461 479 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 NECAB1Q8N987 351 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TC2NQ8N9U0 490 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 MIGA1Q8NAN2 632 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 NEXN-AS1Q8NBZ9 246 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 AGBL3Q8NEM8 1001 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 SLC35F5Q8WV83 523 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 SYAP1Q96A49 352 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF274Q96GC6 653 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 SMC6Q96SB8 1091 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 DDOQ99489 341 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 NACAP1Q9BZK3 213 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 EDEM3Q9BZQ6 932 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 SPRY4Q9C004 299 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ERVMER34-1Q9H9K5 563 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 EPB41L5Q9HCM4 733 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 MMP25Q9NPA2 562 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 PIH1D3Q9NQM4 214 aaKnown RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ANAPC5Q9UJX4 755 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 BTAF1O14981 1849 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 CPED1A4D0V7 1026 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 VPS37CA5D8V6 355 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 B4DGG1 531 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 PFKFB2O60825 505 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 EGFP01133 1207 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 EEF1DP29692 281 aaKnown RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 PRCPP42785 496 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TNNT3P45378 269 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 CDH13P55290 713 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 HMGN5P82970 282 aaKnown RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 COG2Q14746 738 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ALX1Q15699 326 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 NSUN5P2Q63ZY6 315 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 NCAPH2Q6IBW4 605 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 CAMK1DQ8IU85 385 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 FAM184AQ8NB25 1140 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 OR2AK2Q8NG84 335 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 GOT1L1Q8NHS2 421 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 HM13Q8TCT9 377 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 ZFAND2BQ8WV99 257 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 SIPA1Q96FS4 1042 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 HARBI1Q96MB7 349 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TCEANC2Q96MN5 208 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 GPATCH1Q9BRR8 931 aaKnown RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 FAM234AQ9H0X4 552 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 RSPH9Q9H1X1 276 aaPredicted RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 CHCHD3Q9NX63 227 aaKnown RBP4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TAS2R14Q9NYV8 317 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 OR6C3Q9NZP0 311 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 OR14J1Q9UGF5 321 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 TINAGQ9UJW2 476 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 B3GALT5Q9Y2C3 310 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 PCDHGA5Q9Y5G8 931 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 WDR19Q8NEZ3 1342 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 CARMIL3Q8ND23 1372 aa4.01□□□□□ -1.77
SMCO3-201ENST00000316048 DDX60Q8IY21 1712 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 BCORQ6W2J9 1755 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 H3BQV1 296 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 M0QZ24 198 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CNOT3O75175 753 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 RBMXL2O75526 392 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 TGDSO95455 350 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 NUDT3O95989 172 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 FSHBP01225 129 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 HIST1H2ABP04908 130 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 ACTN1P12814 892 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 HIST1H2ADP20671 130 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 MAOAP21397 527 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 MYF6P23409 242 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 GYG1P46976 350 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms