RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 FZD3Q9NPG1 666 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 MSRAQ9UJ68 235 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 ARHGAP10A1A4S6 786 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 OR7A17O14581 309 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 MID1O15344 667 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 FFAR2O15552 330 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 HOXC11O43248 304 aaPredicted RBP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 PRAMEF4O60810 478 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 RECQL5O94762 991 aaPredicted RBP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 ATP5BP06576 529 aaKnown RBP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 MAT2AP31153 395 aaKnown RBP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 PRAMEF9Q5VWM5 478 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 CRTC3Q6UUV7 619 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 CHRDL2Q6WN34 429 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 FRA10AC1Q70Z53 315 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 ULK2Q8IYT8 1036 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 AADATQ8N5Z0 425 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 L3HYPDHQ96EM0 354 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 LYSMD1Q96S90 227 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 TCF12Q99081 682 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 P2RY13Q9BPV8 354 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 SLAMF8Q9P0V8 285 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 LNPEPQ9UIQ6 1025 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 CDH7Q9ULB5 785 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 PPM1HQ9ULR3 514 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 SPECC1L-ADORA2AF8WAN1 911 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 NPHS1O60500 1241 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 LAMP2P13473 410 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 NNMTP40261 264 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 HMGCS1Q01581 520 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 ASPHQ12797 758 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 KRT72Q14CN4 511 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 HNRNPA1L2Q32P51 320 aaKnown RBP6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 GRAMD4Q6IC98 578 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 FAM124AQ86V42 546 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 LMNTD2Q8IXW0 634 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 VPS33AQ96AX1 596 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 AP2M1Q96CW1 435 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 OR2AG1Q9H205 316 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 TMEM245Q9H330 911 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 SYTL2Q9HCH5 934 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 PRSS16Q9NQE7 514 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 POLG2Q9UHN1 485 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 APPL1Q9UKG1 709 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 CA5BQ9Y2D0 317 aa6.88□□□□□ -1.31
LYSMD3-201ENST00000315948 LRRK1Q38SD2 2015 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 TRPM6Q9BX84 2022 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 FBP2O00757 339 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 SNX2O60749 519 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 PYGLP06737 847 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 CAPN1P07384 714 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 ENO3P13929 434 aaPredicted RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 COPAP53621 1224 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 ST8SIA6P61647 398 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 HENMT1Q5T8I9 393 aaKnown RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 GOLGA7Q7Z5G4 137 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 FUNDC1Q8IVP5 155 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 ZNF641Q96N77 438 aaPredicted RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 S1PR5Q9H228 398 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 TTYH1Q9H313 450 aaPredicted RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 ZNF385DQ9H6B1 395 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 HEBP1Q9NRV9 189 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 RNF11Q9Y3C5 154 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 OR1A2Q9Y585 309 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 AGAP14A8MT82 685 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 AZIN1O14977 448 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 C1QCP02747 245 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 RPS17P08708 135 aaKnown RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 C6P13671 934 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 EPORP19235 508 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 P2RY2P41231 377 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 SKIV2L2P42285 1042 aaKnown RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 GALK1P51570 392 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 HK2P52789 917 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 TSTA3Q13630 321 aaPredicted RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 LAMB3Q13751 1172 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 ABRAXAS2Q15018 415 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 VPS26BQ4G0F5 336 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 AGKQ53H12 422 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 RETREG3Q86VR2 466 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 OR4F6Q8NGB9 312 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 CLHC1Q8NHS4 586 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 RHEBL1Q8TAI7 183 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 PYDC1Q8WXC3 89 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 TUBGCP3Q96CW5 907 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 TUBGCP5Q96RT8 1024 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 CEP44Q9C0F1 390 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 GNPTGQ9UJJ9 305 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 CNOT6Q9ULM6 557 aaKnown RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 PDE10AQ9Y233 779 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 PPIL1Q9Y3C6 166 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 NUP214P35658 2090 aaPredicted RBP6.87□□□□□ -1.31
LYSMD3-201ENST00000315948 PRAMEF33A0A0G2JMD5 474 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms