RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ERVK-10P10266 1014 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 RALBP11234 206 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 ATP1B2P14415 290 aaPredicted RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 SDHBP21912 280 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 PMLP29590 882 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 ABCG1P45844 678 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 CSE1LP55060 971 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 EIF3BP55884 814 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 CTBP1Q13363 440 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 THOC5Q13769 683 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 NFE2L1Q14494 772 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 CRYMQ14894 314 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 BRD3Q15059 726 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 NR0B2Q15466 257 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 HSP90AA5PQ58FG0 334 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 ZNF789Q5FWF6 425 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 PERM1Q5SV97 790 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 TEX35Q5T0J7 233 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 ZNF470Q6ECI4 717 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 NEPROQ6NW34 567 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 ZCCHC8Q6NZY4 707 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 UNC5AQ6ZN44 842 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 EFL1Q7Z2Z2 1120 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 DGLUCYQ7Z3D6 616 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 TMEM135Q86UB9 458 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 SLCO6A1Q86UG4 719 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 ZNF761Q86XN6 746 aaPredicted RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 DENND6AQ8IWF6 608 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 NAGSQ8N159 534 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 KRT222Q8N1A0 295 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDC42-201ENST00000315554 SCG3Q8WXD2 468 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 PEX13Q92968 403 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 FAM136AQ96C01 138 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 CDC6Q99741 560 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 C19orf43Q9BQ61 176 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 DUSP23Q9BVJ7 150 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 BRINP2Q9C0B6 783 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 SYNDIG1Q9H7V2 258 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 FBXO6Q9NRD1 293 aaPredicted RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 IARS2Q9NSE4 1012 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 SCHIP1Q9P0W5 487 aaPredicted RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 ZC3H7BQ9UGR2 993 aaKnown RBP7.73□□□□□ -1.17
CDC42-201ENST00000315554 PADI4Q9UM07 663 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 FAM169AQ9Y6X4 670 aa7.73□□□□□ -1.17
CDC42-201ENST00000315554 IGLV3-16A0A075B6K0 115 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 PRAMEF33A0A0G2JMD5 474 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 POM121CA8CG34 1229 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 GPR89AB7ZAQ6 455 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 TPP1O14773 563 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 TNFSF14O43557 240 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 NDUFS3O75489 264 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 PIAS1O75925 651 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 TOP3BO95985 862 aaKnown RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 GPR89BP0CG08 455 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 CEACAM1P13688 526 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 CKMT2P17540 419 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 PAMP19021 973 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 FMO4P31512 558 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 SLC1A2P43004 574 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 PREPP48147 710 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 PRLHRP49683 370 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 ACADVLP49748 655 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 MPP1Q00013 466 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 LRP8Q14114 963 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 HLTFQ14527 1009 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDC42-201ENST00000315554 ITIH4Q14624 930 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 LONRF1Q17RB8 773 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 BCL7AQ4VC05 210 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 UBAP2Q5T6F2 1119 aaKnown RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 N4BP2L1Q5TBK1 243 aaPredicted RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 DUS1LQ6P1R4 473 aaKnown RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 TRMT10BQ6PF06 316 aaKnown RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 XKR5Q6UX68 686 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 CENPUQ71F23 418 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 AMZ2Q86W34 360 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 KCNMB4Q86W47 210 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 MARCH9Q86YJ5 346 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 ARL10Q8N8L6 244 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 Q8N9G6 341 aaPredicted RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 GPR156Q8NFN8 814 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 IFI44Q8TCB0 444 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 CCDC74AQ96AQ1 378 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 C9orf72Q96LT7 481 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 TIMM29Q9BSF4 260 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 L2HGDHQ9H9P8 463 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 PPANQ9NQ55 473 aaKnown RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 WDR37Q9Y2I8 494 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 CRYL1Q9Y2S2 319 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 CFAP20Q9Y6A4 193 aaKnown RBP7.72□□□□□ -1.17
CDC42-201ENST00000315554 TEX264Q9Y6I9 313 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 RNF215Q9Y6U7 377 aa7.72□□□□□ -1.17
CDC42-201ENST00000315554 CNOT1A5YKK6 2376 aaKnown RBP7.71□□□□□ -1.17
CDC42-201ENST00000315554 ARID1BQ8NFD5 2236 aaPredicted RBP7.71□□□□□ -1.17
CDC42-201ENST00000315554 MGAT4DA6NG13 374 aa7.71□□□□□ -1.18
CDC42-201ENST00000315554 OR52A4PA6NMU1 304 aa7.71□□□□□ -1.18
CDC42-201ENST00000315554 E7ESA3 106 aa7.71□□□□□ -1.18
CDC42-201ENST00000315554 NDC80O14777 642 aa7.71□□□□□ -1.18
CDC42-201ENST00000315554 TRIM16O95361 564 aa7.71□□□□□ -1.18
CDC42-201ENST00000315554 CKMT1AP12532 417 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms