RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CYP11A1P05108 521 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 ANXA6P08133 673 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 BEX3Q00994 111 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 PLIN5Q00G26 463 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 CHRNB3Q05901 458 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 ILF2Q12905 390 aaKnown RBP13.27□□□□□ -0.28
SKA3-202ENST00000314759 SF3B4Q15427 424 aaKnown RBP eCLIP13.27□□□□□ -0.28
SKA3-202ENST00000314759 NKG7Q16617 165 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 SULT1C3Q6IMI6 304 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 LAIR2Q6ISS4 152 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 IGSF8Q969P0 613 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 CGREF1Q99674 301 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 GPR21Q99679 349 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 AKIP1Q9NQ31 210 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 PDE10AQ9Y233 779 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.28
SKA3-202ENST00000314759 SYCE1LA8MT33 242 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 LSM1O15116 133 aaKnown RBP13.27□□□□□ -0.29
SKA3-202ENST00000314759 SOAT2O75908 522 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 MYO1DO94832 1006 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 POMCP01189 267 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 FGF1P05230 155 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 GGT1P19440 569 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 AGXTP21549 392 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 TGM1P22735 817 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 HK3P52790 923 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 DGKQP52824 942 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 ATP6AP1LQ52LC2 224 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 TTC23Q5W5X9 447 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 EFL1Q7Z2Z2 1120 aaKnown RBP13.27□□□□□ -0.29
SKA3-202ENST00000314759 RBM23Q86U06 439 aaKnown RBP13.27□□□□□ -0.29
SKA3-202ENST00000314759 OR52B6Q8NGF0 335 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 PSD2Q9BQI7 771 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 ACTL8Q9H568 366 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 ATP13A3Q9H7F0 1226 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 MTRRQ9UBK8 725 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 NEUROG3Q9Y4Z2 214 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.29
SKA3-202ENST00000314759 C16orf96A6NNT2 1141 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 INMTO95050 263 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 HPRP00739 348 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 HLA-DPA1P20036 260 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 SELENBP1Q13228 472 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 CARTPTQ16568 116 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 OVOS1Q6IE37 1185 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 ENPP6Q6UWR7 440 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 GPRIN3Q6ZVF9 776 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 CIR1Q86X95 450 aaPredicted RBP13.26□□□□□ -0.29
SKA3-202ENST00000314759 PARP8Q8N3A8 854 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 ZNF583Q96ND8 569 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 HBEGFQ99075 208 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 ALOXE3Q9BYJ1 711 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 SMPD4Q9NXE4 827 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 UTS2RQ9UKP6 389 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 E2F3O00716 465 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 UGT2B4P06133 528 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 G6PDP11413 515 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 PBX3P40426 434 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 GSSP48637 474 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 OCA2Q04671 838 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 LAPTM5Q13571 262 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 CTF1Q16619 201 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 SDHAF4Q5VUM1 108 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 SPATA2LQ8IUW3 424 aaPredicted RBP13.26□□□□□ -0.29
SKA3-202ENST00000314759 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 OSBPL10Q9BXB5 764 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 POLR1EQ9GZS1 481 aaKnown RBP13.26□□□□□ -0.29
SKA3-202ENST00000314759 SCUBE2Q9NQ36 999 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 COMMD8Q9NX08 183 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 EIF2B4Q9UI10 523 aaKnown RBP13.26□□□□□ -0.29
SKA3-202ENST00000314759 BAG5Q9UL15 447 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 F8W810 466 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 PFDN6O15212 129 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 TSPAN12O95859 305 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 ITGB1P05556 798 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 OR4Q2P0C623 313 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 ALDH4A1P30038 563 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 ACVRL1P37023 503 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 TBX4P57082 545 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 ERVPABLB-1P60509 514 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 PPP2R2BQ00005 443 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 CD47Q08722 323 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 FBXL22Q6P050 247 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 TXNDC11Q6PKC3 985 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 FRA10AC1Q70Z53 315 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 SLCO6A1Q86UG4 719 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 SCN4BQ8IWT1 228 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 FBXO30Q8TB52 745 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 FIG4Q92562 907 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 MUL1Q969V5 352 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 RDH12Q96NR8 316 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 TPK1Q9H3S4 243 aa13.26□□□□□ -0.29
SKA3-202ENST00000314759 RGS17Q9UGC6 210 aaPredicted RBP13.26□□□□□ -0.29
SKA3-202ENST00000314759 PTPRDP23468 1912 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 GRXCR2A6NFK2 248 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 ARNTLO00327 626 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 CDKN1CP49918 316 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms