RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 RTP1P59025 263 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 CWF19L1Q69YN2 538 aaKnown RBP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 C8orf48Q96LL4 319 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 KCTD7Q96MP8 289 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 EQTNQ9NQ60 294 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 EIF3KQ9UBQ5 218 aaKnown RBP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 PRELID1Q9Y255 219 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 BTRCQ9Y297 605 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF451Q9Y4E5 1061 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 NRXN1Q9ULB1 1477 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 EFCAB9A8MZ26 197 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 M0R036 132 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 VLDLRP98155 873 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 TCEAL3Q969E4 200 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 SSU72Q9NP77 194 aaKnown RBP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 HPF1Q9NWY4 346 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 PRAMEF1O95521 474 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 GHDCQ8N2G8 530 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 KXD1Q9BQD3 176 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 LHX5Q9H2C1 402 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 SPEF1Q9Y4P9 236 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 NR2E3Q9Y5X4 410 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 hCG_1818297A0A087WSY0 165 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 B8ZZF3 427 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 HNRNPLP14866 589 aaKnown RBP eCLIP15.31■□□□□ 0.04
HCFC1-201ENST00000310441 ZYG11AQ6WRX3 759 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 MON1AQ86VX9 555 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 ZBTB2Q8N680 514 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF180Q9UJW8 692 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 TTLL8A6PVC2 850 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 BPGMP07738 259 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 ECT2LQ008S8 904 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 GLYATQ6IB77 296 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 TAMM41Q96BW9 452 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 RHBDF1Q96CC6 855 aa15.31■□□□□ 0.04
HCFC1-201ENST00000310441 SEPHS1P49903 392 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 ZC3H12AQ5D1E8 599 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 GALNT5Q7Z7M9 940 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF570Q96NI8 536 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 SPAM1P38567 509 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 CCR10P46092 362 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PDCD4Q53EL6 469 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PLEKHG4Q58EX7 1191 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 CAND1Q86VP6 1230 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PARGQ86W56 976 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 HTATIP2Q9BUP3 242 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 CHST7Q9NS84 486 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 NPEPPSL1A6NEC2 478 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 FAM86B2P0C5J1 330 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 HSD3B1P14060 373 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 UGT1A3P35503 534 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 FKBP1AP62942 108 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 LY6KQ17RY6 165 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 MED27Q6P2C8 311 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 ALYREFQ86V81 257 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 TOP6BLQ8N6T0 577 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 EVPLQ92817 2033 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PDYNP01213 254 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PLEKHN1Q494U1 663 aaPredicted RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 IQCCQ4KMZ1 466 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 EGFLAMQ63HQ2 1017 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 MAFIPQ8WZ33 124 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 MAF1Q9H063 256 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 GBA3Q9H227 469 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 DGKBQ9Y6T7 804 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 GLYATL1P3A0A0U1RQE8 302 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 MSR1P21757 451 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF709Q8N972 641 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PCDH19Q8TAB3 1148 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 PNPLA2Q96AD5 504 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 NPAS2Q99743 824 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 RUVBL1Q9Y265 456 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 ECHDC2Q86YB7 292 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 KLHL36Q8N4N3 616 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 OR10G6Q8NH81 332 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 BRINP2Q9C0B6 783 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 ARHGEF4Q9NR80 690 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 YES1P07947 543 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 CSTF1Q05048 431 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 NR4A3Q92570 626 aa15.3■□□□□ 0.04
HCFC1-201ENST00000310441 SNRNP25Q9BV90 132 aaKnown RBP15.3■□□□□ 0.04
HCFC1-201ENST00000310441 SLC2A2P11168 524 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-201ENST00000310441 MAP3K8P41279 467 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TGFB2P61812 414 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 CLNKQ7Z7G1 428 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TRABD2AQ86V40 505 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF227Q86WZ6 799 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 TTC3P53804 2025 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 MAGEB17A8MXT2 336 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GOT1P17174 413 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 MPP5Q8N3R9 675 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 WASF3Q9UPY6 502 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 MOXD2PA6NHM9 499 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 ZMPSTE24O75844 475 aa15.29■□□□□ 0.04
HCFC1-201ENST00000310441 GSTT2P0CG29 244 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms