RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FAM159BA6NKW6 160 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 PDZK1P1A8MUH7 402 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 TNFSF14O43557 240 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 SIGLEC6O43699 453 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 SH3BP5O60239 455 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CBFA2T3O75081 653 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 APOA4P06727 396 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CELA2BP08218 269 aaPredicted RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 ABHD2P08910 425 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 SLC35G4P0C7Q5 338 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 GIMD1P0DJR0 217 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CKMT1AP12532 417 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CEACAM1P13688 526 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 SKIV2L2P42285 1042 aaKnown RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CSE1LP55060 971 aaKnown RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 GPX6P59796 221 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 KYNUQ16719 465 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 PROX2Q3B8N5 592 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 PLA2G4EQ3MJ16 856 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 TTLL9Q3SXZ7 439 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 SYTL3Q4VX76 610 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CCNI2Q6ZMN8 369 aaPredicted RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 OTOAQ7RTW8 1153 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 UNC5BQ8IZJ1 945 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 GPR156Q8NFN8 814 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CCL4L1Q8NHW4 92 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 ELMO1Q92556 727 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 TMEM159Q96B96 161 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 SH3KBP1Q96B97 665 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CNDP2Q96KP4 475 aaKnown RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 APOLD1Q96LR9 279 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 COG4Q9H9E3 785 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 FBXO6Q9NRD1 293 aaPredicted RBP17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 LATS2Q9NRM7 1088 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 NINJ2Q9NZG7 142 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 SLC23A2Q9UGH3 650 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 CRYL1Q9Y2S2 319 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 HEBP2Q9Y5Z4 205 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 PRSS21Q9Y6M0 314 aa17.57■□□□□ 0.4
SSSCA1-201ENST00000309328 A6NCN8 305 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 IFRD1O00458 451 aaPredicted RBP17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 TRIM38O00635 465 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 TM4SF5O14894 197 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 GP1BAP07359 652 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 PNLIPP16233 465 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 CKMT2P17540 419 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 PBLDP30039 288 aaPredicted RBP17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 ATP5DP30049 168 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 FMO4P31512 558 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 GP5P40197 560 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 MAPK9P45984 424 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 FASLGP48023 281 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 PMS2P54278 862 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 BIRC2Q13490 618 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 KLHL38Q2WGJ6 581 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 C14orf28Q4W4Y0 310 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 PLEKHS1Q5SXH7 462 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 EMBQ6PCB8 327 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 IYDQ6PHW0 289 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 CAPN12Q6ZSI9 719 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 SLC9B2Q86UD5 537 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 C17orf82Q86X59 251 aaPredicted RBP17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 CFAP206Q8IYR0 622 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 MAPK15Q8TD08 544 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 ZFPM2Q8WW38 1151 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 ACSS3Q9H6R3 686 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 TBC1D29Q9UFV1 150 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 ST14Q9Y5Y6 855 aa17.56■□□□□ 0.4
SSSCA1-201ENST00000309328 DNAH14Q0VDD8 3507 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 A0A087WUV0 522 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 B4DGG1 531 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 EIF3FO00303 357 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 NUDT21O43809 227 aaKnown RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 VPS26AO75436 327 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 HAUS5O94927 633 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 TRIM16O95361 564 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 AHSGP02765 367 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 GLB1P16278 677 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 CHRM3P20309 590 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 NDUFS1P28331 727 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 DAB2P98082 770 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 MPP1Q00013 466 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 NFE2L1Q14494 772 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 RSPO4Q2I0M5 234 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 ERCC6LQ2NKX8 1250 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 ZNF658BQ4V348 819 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 CTSL3PQ5NE16 218 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 LRRC8EQ6NSJ5 796 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 STRA8Q7Z7C7 330 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 CTAGE3PQ8IX95 158 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 SFRP1Q8N474 314 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 FBF1Q8TES7 1133 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 CCDC97Q96F63 343 aaPredicted RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 AARSD1Q9BTE6 412 aaKnown RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 RHOJQ9H4E5 214 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 SARS2Q9NP81 518 aaKnown RBP17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 POT1Q9NUX5 634 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms