RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 VPS9D1Q9Y2B5 631 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CARNS1A5YM72 827 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 WNT9AO14904 365 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SH3BP5O60239 455 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CACNG3O60359 315 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PCNAP12004 261 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 HOXB2P14652 356 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 TIMP2P16035 220 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PDHA2P29803 388 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 BDKRB1P46663 353 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SPINT3P49223 89 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CLDN2P57739 230 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SH3BP2P78314 561 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 KPNB1Q14974 876 aaKnown RBP8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 ACAP2Q15057 778 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SNCBQ16143 134 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 ITPRIPL2Q3MIP1 535 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 KHDC1Q4VXA5 237 aaKnown RBP8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 FAM180BQ6P0A1 224 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PAOXQ6QHF9 649 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 TIFABQ6ZNK6 161 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 RGS9BPQ6ZS82 235 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 VRK3Q8IV63 474 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CPXM2Q8N436 756 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 ZNF276Q8N554 614 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 NKAPQ8N5F7 415 aaKnown RBP8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 ZBTB2Q8N680 514 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 VPS33AQ96AX1 596 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CCDC134Q9H6E4 229 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 TM7SF3Q9NS93 570 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 HSFX1Q9UBD0 423 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SLC22A14Q9Y267 594 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 WASF2Q9Y6W5 498 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 RAD51BO15315 384 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PRNPP04156 253 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 LAMP2P13473 410 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CASP9P55211 416 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 RALGDSQ12967 914 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 ZNF805Q5CZA5 627 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CTSL3PQ5NE16 218 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SPATA24Q86W54 205 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 TDHQ8IZJ6 230 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PPWD1Q96BP3 646 aaKnown RBP8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 FBXL21Q9UKT6 434 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CA14Q9ULX7 337 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 STON1Q9Y6Q2 735 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PIAS3Q9Y6X2 628 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SPTA1P02549 2419 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 NYNRINQ9P2P1 1898 aaKnown RBP8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CCDC189A1A4V9 331 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 AZIN1O14977 448 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 ESR1P03372 595 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 DGKAP23743 735 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 DIO3P55073 304 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 TFF2Q03403 129 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CAPRIN1Q14444 709 aaKnown RBP8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 RNF43Q68DV7 783 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PARP9Q8IXQ6 854 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PHACTR4Q8IZ21 702 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 KIRREL3Q8IZU9 778 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CD200R1Q8TD46 325 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 PYDC1Q8WXC3 89 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 MRPL38Q96DV4 380 aaKnown RBP8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 C7orf26Q96N11 449 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CDRT15Q96T59 188 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 CD93Q9NPY3 652 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 SCN2AQ99250 2005 aa8.47□□□□□ -1.05
LCLAT1-201ENST00000309052 USP34Q70CQ2 3546 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 MAP3K13O43283 966 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 TBX10O75333 385 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 ZNF821O75541 412 aaPredicted RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 KLF8O95600 359 aaPredicted RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 DNTTP04053 509 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 SBK3P0C264 359 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 C6P13671 934 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 HNRNPH1P31943 449 aaKnown RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 BNIP1Q12981 228 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 FASTKQ14296 549 aaKnown RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 DUS1LQ6P1R4 473 aaKnown RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 PLD3Q8IV08 490 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 CEP70Q8NHQ1 597 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 DNAJB14Q8TBM8 379 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 TSSK3Q96PN8 268 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 SSU72Q9NP77 194 aaKnown RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 MRPL40Q9NQ50 206 aaKnown RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 SAR1AQ9NR31 198 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 SERGEFQ9UGK8 458 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 HS3ST2Q9Y278 367 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 PTPRDP23468 1912 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 NLRC5Q86WI3 1866 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 SYCE1LA8MT33 242 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 C1QTNF3-AMACRE9PGA6 284 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 PAPSS2O95340 614 aaPredicted RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 FGF19O95750 216 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 GSRP00390 522 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 OGNP20774 298 aaKnown RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 HTR6P50406 440 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 TMEM115Q12893 351 aaPredicted RBP8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 ARTNQ5T4W7 220 aa8.46□□□□□ -1.05
LCLAT1-201ENST00000309052 KIAA1211LQ6NV74 962 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms