RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 TUFMP49411 452 aaKnown RBP19.08■□□□□ 0.64
USP48-201ENST00000308271 ZNF33AQ06730 810 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 ATP6AP1Q15904 470 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 TIGD6Q17RP2 521 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 CTC1Q2NKJ3 1217 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 C11orf88Q6PI97 169 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 TCAIMQ8N3R3 496 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 MTMR14Q8NCE2 650 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 C1GALT1C1Q96EU7 318 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 MUS81Q96NY9 551 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 QRFPRQ96P65 431 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 HAPLN3Q96S86 360 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 ADAM2Q99965 735 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 LPIN3Q9BQK8 851 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 FAM105AQ9NUU6 356 aa19.08■□□□□ 0.64
USP48-201ENST00000308271 A8MX80 341 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 hCG_2039718K7EN88 272 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 ERN1O75460 977 aaKnown RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 PRKD3O94806 890 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 TRBC1P01850 177 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 PTSQ03393 145 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 SULT2A1Q06520 285 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 TMEM135Q86UB9 458 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 C11orf65Q8NCR3 313 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 ZCCHC2Q9C0B9 1178 aaKnown RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 C1orf109Q9NX04 203 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 PTGFRNQ9P2B2 879 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 CARD8Q9Y2G2 431 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 M0QX08 132 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 ZNF701M0R085 212 aaPredicted RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 ESR1P03372 595 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 AZGP1P25311 298 aaKnown RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 STAT5AP42229 794 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 POLR2LP62875 67 aaKnown RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 ESAMQ96AP7 390 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 FCRL3Q96P31 734 aaPredicted RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 COPS8Q99627 209 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 OXCT2Q9BYC2 517 aaPredicted RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 ZNF222Q9UK12 451 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 A0A1W2PQH9 124 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 IRGMA1A4Y4 181 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 SOWAHBA6NEL2 793 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 ZW10O43264 779 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 PHC1P78364 1004 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 C6orf183Q5T699 404 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 ANKRD60Q9BZ19 345 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 TOR3AQ9H497 397 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 CLCA2Q9UQC9 943 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 MYH1P12882 1939 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 MYH4Q9Y623 1939 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 SYT16Q17RD7 645 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 FAM151BQ6UXP7 276 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 TRMT11Q7Z4G4 463 aaKnown RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 CPNE9Q8IYJ1 553 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 KRT78Q8N1N4 520 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 OSBPL2Q9H1P3 480 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 SMOXQ9NWM0 555 aa19.07■□□□□ 0.64
USP48-201ENST00000308271 MRPL39Q9NYK5 338 aaKnown RBP19.07■□□□□ 0.64
USP48-201ENST00000308271 PLOD3O60568 738 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 MEP1AQ16819 746 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 KCTD13Q8WZ19 329 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 EMID1Q96A84 441 aaPredicted RBP19.06■□□□□ 0.64
USP48-201ENST00000308271 TMEM169Q96HH4 297 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 SPATA5L1Q9BVQ7 753 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 CDC14AQ9UNH5 594 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 MYBPHLA2RUH7 354 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 CASKO14936 926 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 SLC25A14O95258 325 aaPredicted RBP19.06■□□□□ 0.64
USP48-201ENST00000308271 SNAP29O95721 258 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 BMP2P12643 396 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 SDC2P34741 201 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 BRCC3P46736 316 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 RPS14P62263 151 aaKnown RBP19.06■□□□□ 0.64
USP48-201ENST00000308271 MRPS6P82932 125 aaKnown RBP19.06■□□□□ 0.64
USP48-201ENST00000308271 IL10RBQ08334 325 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 STX4Q12846 297 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 CYP2A13Q16696 494 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 SLC51AQ86UW1 340 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 LPPQ93052 612 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 HMCESQ96FZ2 354 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 VRTNQ9H8Y1 702 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 STOML2Q9UJZ1 356 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 HLA-DQB2P05538 268 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 MYF6P23409 242 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 ASMTP46597 345 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 ZNF404Q494X3 552 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 C5orf22Q49AR2 442 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 PAQR3Q6TCH7 311 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 CLEC20AQ6ZU45 233 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 GPR156Q8NFN8 814 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 NPY6RQ99463 290 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 SLC2A6Q9UGQ3 507 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 CYTH4Q9UIA0 394 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 PMF1-BGLAPU3KQ54 211 aa19.06■□□□□ 0.64
USP48-201ENST00000308271 ITIH1P19827 911 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 MS4A2Q01362 244 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 SP2Q02086 613 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 TPRG1LQ5T0D9 272 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 RASAL3Q86YV0 1011 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ALDH16A1Q8IZ83 802 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms