RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 OR4F6Q8NGB9 312 aa11.21□□□□□ -0.61
SCG2-201ENST00000305409 OR56A4Q8NGH8 313 aa11.21□□□□□ -0.61
SCG2-201ENST00000305409 METTL6Q8TCB7 284 aa11.21□□□□□ -0.61
SCG2-201ENST00000305409 VPS33AQ96AX1 596 aa11.21□□□□□ -0.61
SCG2-201ENST00000305409 MTFMTQ96DP5 389 aaKnown RBP11.21□□□□□ -0.61
SCG2-201ENST00000305409 NAF1Q96HR8 494 aaKnown RBP11.21□□□□□ -0.61
SCG2-201ENST00000305409 MCCC1Q96RQ3 725 aaPredicted RBP11.21□□□□□ -0.61
SCG2-201ENST00000305409 LYSMD1Q96S90 227 aa11.21□□□□□ -0.61
SCG2-201ENST00000305409 WRAP53Q9BUR4 548 aaKnown RBP11.21□□□□□ -0.61
SCG2-201ENST00000305409 CPEB1Q9BZB8 566 aaKnown RBP11.21□□□□□ -0.61
SCG2-201ENST00000305409 NDE1Q9NXR1 346 aa11.21□□□□□ -0.61
SCG2-201ENST00000305409 COQ6Q9Y2Z9 468 aa11.21□□□□□ -0.61
SCG2-201ENST00000305409 KPNA3O00505 521 aaPredicted RBP11.21□□□□□ -0.62
SCG2-201ENST00000305409 OR7A17O14581 309 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 MRASO14807 208 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 TULP3O75386 442 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 ADH5P11766 374 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 CAPN3P20807 821 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.62
SCG2-201ENST00000305409 CASP2P42575 452 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 RGS4P49798 205 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 GTF2H2Q13888 395 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 FLOT2Q14254 428 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 HERC3Q15034 1050 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 FAM78AQ5JUQ0 283 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 GTF2H2CQ6P1K8 395 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 IL27RAQ6UWB1 636 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 METTL3Q86U44 580 aaKnown RBP11.21□□□□□ -0.62
SCG2-201ENST00000305409 AHI1Q8N157 1196 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 GDPD5Q8WTR4 605 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 TUBGCP5Q96RT8 1024 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 IPPKQ9H8X2 491 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 FARSBQ9NSD9 589 aaKnown RBP11.21□□□□□ -0.62
SCG2-201ENST00000305409 SPATS2LQ9NUQ6 558 aaKnown RBP11.21□□□□□ -0.62
SCG2-201ENST00000305409 ZDHHC3Q9NYG2 299 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 WWOXQ9NZC7 414 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 ZNHIT2Q9UHR6 403 aa11.21□□□□□ -0.62
SCG2-201ENST00000305409 YBX2Q9Y2T7 364 aaKnown RBP11.21□□□□□ -0.62
SCG2-201ENST00000305409 MTCL1Q9Y4B5 1905 aaKnown RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 TMEM202A6NGA9 273 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 INPP4BO15327 924 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 NRP2O60462 931 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 LBPP18428 481 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 DGKAP23743 735 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 NSG1P42857 185 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 PLIN5Q00G26 463 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 LRP8Q14114 963 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 TXNDC11Q6PKC3 985 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 MACC1Q6ZN28 852 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 GET4Q7L5D6 327 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 ADAMTSL2Q86TH1 951 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 LILRA3Q8N6C8 439 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 BHLHE22Q8NFJ8 381 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 PHOSPHO2Q8TCD6 241 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 N4BP2L2Q92802 583 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 PYCR2Q96C36 320 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 ZNF641Q96N77 438 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 ASB2Q96Q27 587 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 HTATIP2Q9BUP3 242 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 RIOK2Q9BVS4 552 aaKnown RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 FAM126AQ9BYI3 521 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 LRRC42Q9Y546 428 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 SLC22A2O15244 555 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 RAD51BO15315 384 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 MLYCDO95822 493 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 S100BP04271 92 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 HNRNPA1P09651 372 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCG2-201ENST00000305409 PFKLP17858 780 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 CD9P21926 228 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 XPAP23025 273 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 ADSLP30566 484 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 NNMTP40261 264 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 CCNG1P51959 295 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 UFM1P61960 85 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 SHHQ15465 462 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 GPR33Q49SQ1 333 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 CYP2R1Q6VVX0 501 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 Q6ZSR9 355 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 CBARPQ8N350 705 aaPredicted RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
SCG2-201ENST00000305409 TMEM79Q9BSE2 394 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 CEP44Q9C0F1 390 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 NUDT4Q9NZJ9 180 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 ANGPTL2Q9UKU9 493 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 AK5Q9Y6K8 562 aa11.2□□□□□ -0.62
SCG2-201ENST00000305409 GBF1Q92538 1859 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 PRORSD1PA6NEY8 169 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 C16orf96A6NNT2 1141 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 FADS2P1A8MWK0 482 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 H3BNX3 289 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 FGF19O95750 216 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 CISD3P0C7P0 127 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 UROSP10746 265 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 ILF2Q12905 390 aaKnown RBP11.19□□□□□ -0.62
SCG2-201ENST00000305409 STX5Q13190 355 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 ABRAXAS2Q15018 415 aa11.19□□□□□ -0.62
SCG2-201ENST00000305409 RARS2Q5T160 578 aaKnown RBP11.19□□□□□ -0.62
SCG2-201ENST00000305409 IZUMO2Q6UXV1 221 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms