RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 POFUT2Q9Y2G5 429 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 TMED5Q9Y3A6 229 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 COLEC10Q9Y6Z7 277 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ANKRD36CQ5JPF3 1778 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CACNB4O00305 520 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 GNAZP19086 355 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ITGA3P26006 1051 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PPM1AP35813 382 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SEPHS1P49903 392 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ZBTB6Q15916 424 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 USP41Q3LFD5 358 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 KHDC1Q4VXA5 237 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PPP1R26Q5T8A7 1209 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 FATE1Q969F0 183 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 FAM84AQ96KN4 292 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 NEDD4LQ96PU5 975 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 COPS4Q9BT78 406 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ZIM2Q9NZV7 527 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 USP20Q9Y2K6 914 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 NUP98P52948 1817 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 WRBO00258 174 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 KRT33AO76009 404 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PRLP01236 227 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SPATA31C1P0DKV0 1188 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 FECHP22830 423 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SSR2P43308 183 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 DNASE1L1P49184 302 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PRKAG1P54619 331 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 FSTL1Q12841 308 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RAPSNQ13702 412 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 DLG2Q15700 870 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TIGD6Q17RP2 521 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PYHIN1Q6K0P9 492 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TRIM74Q86UV6 250 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TRIM73Q86UV7 250 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RAVER1Q8IY67 606 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SNX33Q8WV41 574 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CDT1Q9H211 546 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RABL2AQ9UBK7 228 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 FBXO10Q9UK96 956 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RABL2BQ9UNT1 228 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PLCL2Q9UPR0 1127 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 NME6O75414 186 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 AGR2O95994 175 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CTSEP14091 401 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 DPEP1P16444 411 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RHOQP17081 205 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PTGIRP43119 386 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RAP1GAP2Q684P5 730 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PGBD2Q6P3X8 592 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TTLQ8NG68 377 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 LRTOMTQ8WZ04 291 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 OR8D1Q8WZ84 308 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 LPGAT1Q92604 370 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RFT1Q96AA3 541 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CPNE2Q96FN4 548 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PCDHGB6Q9Y5F9 930 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 KANTRA0A1W2PQU2 76 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 DNAJA1P31689 397 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 GRIA2P42262 883 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PPP2R2BQ00005 443 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RBBP4Q09028 425 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TAF1AQ15573 450 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ARL13AQ5H913 290 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RNF31Q96EP0 1072 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RDH12Q96NR8 316 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CLPXO76031 633 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CYP11A1P05108 521 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ANXA8P13928 327 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 GLDCP23378 1020 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A3P35503 534 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 RGS8P57771 180 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 IFI44LQ53G44 452 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 APOBEC3HQ6NTF7 200 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 KLHL36Q8N4N3 616 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CCDC115Q96NT0 180 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SLC6A15Q9H2J7 730 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PLEKHA1Q9HB21 404 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 FABP12A6NFH5 140 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 YDJCA8MPS7 323 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PDHXO00330 501 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 KMOO15229 486 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 APOL3O95236 402 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ESR1P03372 595 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT2B4P06133 528 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 CD2P06729 351 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ERVK-8P63133 956 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 GEMIN6Q8WXD5 167 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SLC9A6Q92581 669 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 AKAP1Q92667 903 aaKnown RBP eCLIP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 NSMCE3Q96MG7 304 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF570Q96NI8 536 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 GBA2Q9HCG7 927 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF639Q9UID6 485 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 MFSD11O43934 449 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 UGT1A9O60656 530 aa7.55□□□□□ -1.2
SF3B3-201ENST00000302516 SLC25A14O95258 325 aaPredicted RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 TOP3BO95985 862 aaKnown RBP7.55□□□□□ -1.2
SF3B3-201ENST00000302516 PSKH1P11801 424 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms