RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 DLGAP2Q9P1A6 1054 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 SOCS5O75159 536 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 FGF4P08620 206 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 POLR2EP19388 210 aaKnown RBP14.35□□□□□ -0.11
SMG8-201ENST00000300917 B4GALNT1Q00973 533 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 HERC3Q15034 1050 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 GRAMD4Q6IC98 578 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 VRK3Q8IV63 474 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 ZNF483Q8TF39 744 aaPredicted RBP14.35□□□□□ -0.11
SMG8-201ENST00000300917 ZFP14Q9HCL3 533 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 PCDHB1Q9Y5F3 818 aa14.35□□□□□ -0.11
SMG8-201ENST00000300917 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 INPP4BO15327 924 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 C1SP09871 688 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 ACADSP16219 412 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 PSMC3P17980 439 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 HMOX2P30519 316 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 MAPRE2Q15555 327 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 MILR1Q7Z6M3 343 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 JADE3Q92613 823 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 WRAP53Q9BUR4 548 aaKnown RBP14.34□□□□□ -0.11
SMG8-201ENST00000300917 FAM126AQ9BYI3 521 aaPredicted RBP14.34□□□□□ -0.11
SMG8-201ENST00000300917 KLQ9UEF7 1012 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 PLXNA4Q9HCM2 1894 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 RAD51BO15315 384 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 TAPBPO15533 448 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 POP4O95707 220 aaKnown RBP14.34□□□□□ -0.11
SMG8-201ENST00000300917 XPAP23025 273 aaPredicted RBP14.34□□□□□ -0.11
SMG8-201ENST00000300917 PBLDP30039 288 aaPredicted RBP14.34□□□□□ -0.11
SMG8-201ENST00000300917 ADSLP30566 484 aaPredicted RBP14.34□□□□□ -0.11
SMG8-201ENST00000300917 CCR7P32248 378 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 ABRAXAS2Q15018 415 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 IL23RQ5VWK5 629 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 GDPD4Q6W3E5 623 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 HSD11B1LQ7Z5J1 315 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 C12orf40Q86WS4 652 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 CLHC1Q8NHS4 586 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 LRGUKQ96M69 825 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 SPAG4Q9NPE6 437 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 MAP10Q9P2G4 905 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 USP22Q9UPT9 525 aa14.34□□□□□ -0.11
SMG8-201ENST00000300917 KPNA3O00505 521 aaPredicted RBP14.33□□□□□ -0.11
SMG8-201ENST00000300917 TRIM38O00635 465 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 OR7A17O14581 309 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 SH3BGRLO75368 114 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 HSPA1AP0DMV8 641 aaKnown RBP14.33□□□□□ -0.11
SMG8-201ENST00000300917 HSPA1BP0DMV9 641 aaKnown RBP14.33□□□□□ -0.11
SMG8-201ENST00000300917 UROSP10746 265 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 DGKAP23743 735 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 MAPK8P45983 427 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 KLC1Q07866 573 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 PPIGQ13427 754 aaKnown RBP eCLIP14.33□□□□□ -0.11
SMG8-201ENST00000300917 CRY1Q16526 586 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 CPSF6Q16630 551 aaKnown RBP eCLIP14.33□□□□□ -0.11
SMG8-201ENST00000300917 RABL3Q5HYI8 236 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 AAGABQ6PD74 315 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 ADGRD2Q7Z7M1 963 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 LILRA2Q8N149 483 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 LMLNQ96KR4 655 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 TMEM74Q96NL1 305 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 ASB2Q96Q27 587 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 PKP2Q99959 881 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 LRCH1Q9Y2L9 728 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 COQ6Q9Y2Z9 468 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 NDUFAF1Q9Y375 327 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 DNAH14Q0VDD8 3507 aa14.33□□□□□ -0.11
SMG8-201ENST00000300917 ZNF839A8K0R7 811 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 STX16O14662 325 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 SNUPNO95149 360 aaKnown RBP14.33□□□□□ -0.12
SMG8-201ENST00000300917 MLYCDO95822 493 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 PENKP01210 267 aaPredicted RBP14.33□□□□□ -0.12
SMG8-201ENST00000300917 GPRC6AQ5T6X5 926 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 AMIGO2Q86SJ2 522 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 PQLC1Q8N2U9 271 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 ARMC5Q96C12 935 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 ARL15Q9NXU5 204 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 TMPRSS11EQ9UL52 423 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 WASH3PC4AMC7 463 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 SLC22A2O15244 555 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 CA3P07451 260 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 DGKQP52824 942 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 PAGE3Q5JUK9 113 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 TXNDC11Q6PKC3 985 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 Q6ZSR9 355 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 TRIM74Q86UV6 250 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 SFRP1Q8N474 314 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 LILRA3Q8N6C8 439 aaPredicted RBP14.33□□□□□ -0.12
SMG8-201ENST00000300917 LMNTD1Q8N9Z9 388 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 KLHL4Q9C0H6 718 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 ATG10Q9H0Y0 220 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 AURKCQ9UQB9 309 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 ERVW-1Q9UQF0 538 aa14.33□□□□□ -0.12
SMG8-201ENST00000300917 POLR3HQ9Y535 204 aaPredicted RBP14.33□□□□□ -0.12
SMG8-201ENST00000300917 TRANK1O15050 2925 aa14.32□□□□□ -0.12
SMG8-201ENST00000300917 A0A1W2PQ67 120 aa14.32□□□□□ -0.12
SMG8-201ENST00000300917 GRIA3P42263 894 aa14.32□□□□□ -0.12
SMG8-201ENST00000300917 NFYCQ13952 458 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms