RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SLC38A8A6NNN8 435 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 F2P00734 622 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 CNPP09543 421 aaKnown RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 COL6A2P12110 1019 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 CYP3A5P20815 502 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 GATMP50440 423 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 LAPTM5Q13571 262 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 VITQ6UXI7 678 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 LRRC49Q8IUZ0 686 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TMEM132CQ8N3T6 1108 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 SHKBP1Q8TBC3 707 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 FCRL3Q96P31 734 aaPredicted RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 PIPSLA2A3N6 862 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 C9IYK1 514 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 VPS4BO75351 444 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 OR4F21O95013 312 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 ANXA5P08758 320 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 ZNF10P21506 573 aaPredicted RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 TIE1P35590 1138 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 DHPSP49366 369 aaPredicted RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 GJA9P57773 515 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TSNQ15631 228 aaKnown RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 ZC3HC1Q86WB0 502 aaKnown RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 BBS7Q8IWZ6 715 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 NRSN1Q8IZ57 195 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 CENPSQ8N2Z9 138 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 ZBTB8BQ8NAP8 495 aaPredicted RBP13.28□□□□□ -0.28
HPS3-201ENST00000296051 SMYD1Q8NB12 490 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TSTD1Q8NFU3 115 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 SLC47A1Q96FL8 570 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 DMRTB1Q96MA1 342 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 CDK15Q96Q40 435 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 CYP2S1Q96SQ9 504 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TRMOQ9BU70 441 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 NMUR1Q9HB89 426 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 ITM2CQ9NQX7 267 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 KRT84Q9NSB2 600 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 IKZF3Q9UKT9 509 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TMCC3Q9ULS5 477 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 TBC1D30Q9Y2I9 924 aa13.28□□□□□ -0.28
HPS3-201ENST00000296051 RGS14O43566 566 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 ZNF12P17014 697 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 PIM3Q86V86 326 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 C19orf18Q8NEA5 215 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 ENKURQ8TC29 256 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 ISOC1Q96CN7 298 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 FERD3LQ96RJ6 166 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 KCNA7Q96RP8 456 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 PCDHGC4Q9Y5F7 938 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 PGLSO95336 258 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 PRKACGP22612 351 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 CLCQ05315 142 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 LAPTM4AQ15012 233 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 TNFAIP8L3Q5GJ75 292 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 ALKBH2Q6NS38 261 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 ZNF366Q8N895 744 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 OR4L1Q8NH43 312 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 GPR21Q99679 349 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 GIN1Q9NXP7 522 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 YIPF1Q9Y548 306 aa13.27□□□□□ -0.28
HPS3-201ENST00000296051 TPRP12270 2363 aaKnown RBP13.27□□□□□ -0.29
HPS3-201ENST00000296051 A0A1B0GVM2 712 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 TCAF2A6NFQ2 919 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 A8MT66 165 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 CENPXA8MT69 81 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.27□□□□□ -0.29
HPS3-201ENST00000296051 ARPC2O15144 300 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 PRNPP04156 253 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 FUT4P22083 530 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 IL12RB1P42701 662 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 POLD2P49005 469 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 GPR15P49685 360 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 EPS8Q12929 822 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 ZC3H7AQ8IWR0 971 aaKnown RBP13.27□□□□□ -0.29
HPS3-201ENST00000296051 MARVELD2Q8N4S9 558 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 OR4K2Q8NGD2 314 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 WDR12Q9GZL7 423 aaKnown RBP13.27□□□□□ -0.29
HPS3-201ENST00000296051 HAPLN2Q9GZV7 340 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 AGO3Q9H9G7 860 aaKnown RBP13.27□□□□□ -0.29
HPS3-201ENST00000296051 FZD10Q9ULW2 581 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 TCAF1Q9Y4C2 921 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 FMO3P31513 532 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 TAB1Q15750 504 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 ALFQ53S48 1182 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 KLHL17Q6TDP4 642 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 SYT12Q8IV01 421 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 C2orf73Q8N5S3 287 aaPredicted RBP13.27□□□□□ -0.29
HPS3-201ENST00000296051 ANKLE1Q8NAG6 615 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 HM13Q8TCT9 377 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 CHCHD6Q9BRQ6 235 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 GTF2A1LQ9UNN4 478 aa13.27□□□□□ -0.29
HPS3-201ENST00000296051 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.29
HPS3-201ENST00000296051 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 BMP10O95393 424 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 VIPP01282 170 aa13.26□□□□□ -0.29
HPS3-201ENST00000296051 GTF2E2P29084 291 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms