RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 SPAG16Q8N0X2 631 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 OR6N1Q8NGY5 312 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 CLP1Q92989 425 aaKnown RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 IFNA21P01568 189 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 MAGEA3P43357 314 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TBRG1Q3YBR2 411 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 RALGPS2Q86X27 583 aaPredicted RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 RIOX2Q8IUF8 465 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 INO80EQ8NBZ0 244 aaPredicted RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 B3GALT6Q96L58 329 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 RUVBL1Q9Y265 456 aaKnown RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 DHX15O43143 795 aaKnown RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 MSCO60682 206 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 UNC5AQ6ZN44 842 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 PSTKQ8IV42 348 aaKnown RBP12.31□□□□□ -0.44
SLX4-201ENST00000294008 JAGN1Q8N5M9 183 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 FAM46DQ8NEK8 389 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 PIGXQ8TBF5 258 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 BTBD10Q9BSF8 475 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 SDHAF3Q9NRP4 125 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 ZNF69Q9UC07 566 aa12.31□□□□□ -0.44
SLX4-201ENST00000294008 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 HHLA1C9JL84 531 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 PRLRP16471 622 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 PTNP21246 168 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 SLC26A2P50443 739 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 HERV-K104P61576 105 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 SNTA1Q13424 505 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 ZMYM4Q5VZL5 1548 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 TEX13CA0A0J9YWL9 993 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 TEX13DA0A0J9YY54 714 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 F8VP50 259 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 FGF10O15520 208 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 TRUB2O95900 331 aaKnown RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 ATP5A1P25705 553 aaKnown RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 ACSL1P33121 698 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 LACTB2Q53H82 288 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 LDLRAP1Q5SW96 308 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 GCNT6Q5T4J0 391 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 UBE2UQ5VVX9 321 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 KCTD9Q7L273 389 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 OR4L1Q8NH43 312 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 THEM6Q8WUY1 208 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 MRPS30Q9NP92 439 aaKnown RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 BIVM-ERCC5R4GMW8 1640 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 MAPK8P45983 427 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 SYCE2Q6PIF2 218 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 OTUB2Q96DC9 234 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 IRF6O14896 467 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 PROSCO94903 275 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 PAX7P23759 505 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 SULT2A1Q06520 285 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 PGM5Q15124 567 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 RBFAQ8N0V3 343 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 THAP3Q8WTV1 239 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 APOPT1Q96IL0 206 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 STOX2Q9P2F5 926 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 C14orf166Q9Y224 244 aaKnown RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 CLN5O75503 358 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 CD2P06729 351 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 OR4Q2P0C623 313 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 AP3S2P59780 193 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 ACTR1AP61163 376 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 GALK2Q01415 458 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 TRMT5Q32P41 509 aaKnown RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 TMEM17Q86X19 198 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 HDAC10Q969S8 669 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 PCDH18Q9HCL0 1135 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 A0A1B0GVT2 93 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 CCR10P46092 362 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 PLEKHG6Q3KR16 790 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 FAM76BQ5HYJ3 339 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 DCST1Q5T197 706 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 TMEM86AQ8N2M4 240 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 ZNF676Q8N7Q3 588 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 UROC1Q96N76 676 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 ZNF570Q96NI8 536 aa12.3□□□□□ -0.44
SLX4-201ENST00000294008 CCNL2Q96S94 520 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 DNMT3AQ9Y6K1 912 aaPredicted RBP12.3□□□□□ -0.44
SLX4-201ENST00000294008 GLYATL1P3A0A0U1RQE8 302 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 TVP23AA6NH52 213 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 LSM8O95777 96 aaKnown RBP12.29□□□□□ -0.44
SLX4-201ENST00000294008 MIPP30301 263 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 PSEN1P49768 467 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 LIX1LQ8IVB5 337 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 ADAD1Q96M93 576 aaKnown RBP12.29□□□□□ -0.44
SLX4-201ENST00000294008 IL20RAQ9UHF4 553 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 GRXCR1A8MXD5 290 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 AP5Z1O43299 807 aa12.29□□□□□ -0.44
SLX4-201ENST00000294008 CORO1AP31146 461 aaKnown RBP12.29□□□□□ -0.44
SLX4-201ENST00000294008 ITIH4Q14624 930 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms