RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 COQ5Q5HYK3 327 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 TMEM240Q5SV17 173 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 ADGRG5Q8IZF4 528 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 TRPV3Q8NET8 790 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 COX4I2Q96KJ9 171 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 CNDP2Q96KP4 475 aaKnown RBP18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 AKTIPQ9H8T0 292 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 CATSPERZQ9NTU4 200 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 TMEM9Q9P0T7 183 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 PCDHB9Q9Y5E1 797 aa18.08■□□□□ 0.49
PDLIM3-201ENST00000284767 FAM149AA5PLN7 773 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 LEFTY2O00292 366 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 CTPS1P17812 591 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 IRS1P35568 1242 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 KCNC1P48547 511 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 TIAL1Q01085 375 aaKnown RBP eCLIP18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 RAB39AQ14964 217 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 EML3Q32P44 896 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 SLC44A4Q53GD3 710 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 NCEH1Q6PIU2 408 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 MIER2Q8N344 545 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 CYGBQ8WWM9 190 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 RPL10LQ96L21 214 aaKnown RBP18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 C3orf30Q96M34 536 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 TUBA1CQ9BQE3 449 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 C17orf80Q9BSJ5 609 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 TLR9Q9NR96 1032 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 LSM7Q9UK45 103 aaKnown RBP18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 OAZ3Q9UMX2 235 aa18.08■□□□□ 0.48
PDLIM3-201ENST00000284767 KANSL1LA0AUZ9 987 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 ACOX3O15254 700 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 SEC24DO94855 1032 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 GLUD1P00367 558 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 MYOGP15173 224 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 CAPGP40121 348 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 FPGSQ05932 587 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 LMAN2Q12907 356 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 CMTM8Q8IZV2 173 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 TBC1D15Q8TC07 691 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 PNPT1Q8TCS8 783 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 POF1BQ8WVV4 589 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 LRCH3Q96II8 777 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 PAIP1Q9H074 479 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 ASAH2Q9NR71 780 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 FKBPLQ9UIM3 349 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 FADS3Q9Y5Q0 445 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 UBA6A0AVT1 1052 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 FXYD1O00168 92 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 TLL1O43897 1013 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 WISP3O95389 354 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 MATN4O95460 622 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 ALPIP09923 528 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 GFAPP14136 432 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 UGT1A6P19224 532 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 NAA20P61599 178 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 HERVK_113P63132 956 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 CBX3Q13185 183 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 UNC50Q53HI1 259 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 ZNF697Q5TEC3 545 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 DHRSXQ8N5I4 330 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 ERVK-6Q9BXR3 956 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 TNKS2Q9H2K2 1166 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 IL1RL2Q9HB29 575 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 NLE1Q9NVX2 485 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 POLR3BQ9NW08 1133 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 CMTM6Q9NX76 183 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 SMPD3Q9NY59 655 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 EGFL7Q9UHF1 273 aa18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 INTS6Q9UL03 887 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-201ENST00000284767 TRAV19A0A0A6YYK7 116 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 ARPC2O15144 300 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 LATS1O95835 1130 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 FGF4P08620 206 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 PORP16435 677 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 CAPN3P20807 821 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 CTSOP43234 321 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 NTHL1P78549 312 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 SLC7A9P82251 487 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 CREMQ03060 361 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 GPR107Q5VW38 600 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 CCDC149Q6ZUS6 474 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 HTR3DQ70Z44 454 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 FAM217AQ8IXS0 508 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 PIANPQ8IYJ0 282 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 POLR1BQ9H9Y6 1135 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 EVLQ9UI08 416 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 REV3LO60673 3130 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 INHBBP09529 407 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 SLC6A2P23975 617 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 GRSF1Q12849 480 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 ANKDD1AQ495B1 522 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 VPS26BQ4G0F5 336 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 MRNIPQ6NTE8 343 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 PSAPL1Q6NUJ1 521 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 RYBPQ8N488 228 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 LRRC58Q96CX6 371 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 EID2BQ96D98 161 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 FBXL20Q96IG2 436 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 ALG9Q9H6U8 611 aa18.06■□□□□ 0.48
PDLIM3-201ENST00000284767 PALMDQ9NP74 551 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms