RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 GRIA2P42262 883 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 PIK3CGP48736 1102 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 KPNA2P52292 529 aaKnown RBP10.81□□□□□ -0.68
GGPS1-201ENST00000282841 NME5P56597 212 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 TGFBIQ15582 683 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 SEL1L3Q68CR1 1132 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 FRA10AC1Q70Z53 315 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 ZBTB2Q8N680 514 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 P2RY13Q9BPV8 354 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 RABL2BQ9UNT1 228 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 IGLON5A6NGN9 336 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 TMEM114B3SHH9 223 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 C9JVG2 144 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 KERAO60938 352 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 RNASEH2AO75792 299 aaKnown RBP10.81□□□□□ -0.68
GGPS1-201ENST00000282841 NSG1P42857 185 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 HERVK_113P63132 956 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 HTR4Q13639 388 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 LSM12Q3MHD2 195 aaKnown RBP10.81□□□□□ -0.68
GGPS1-201ENST00000282841 THEMIS2Q5TEJ8 643 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 RAET1GQ6H3X3 334 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 EPGNQ6UW88 154 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 FRMD7Q6ZUT3 714 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 DPPA4Q7L190 304 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 CBARPQ8N350 705 aaPredicted RBP10.81□□□□□ -0.68
GGPS1-201ENST00000282841 OR52B6Q8NGF0 335 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 CSGALNACT1Q8TDX6 532 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 C3orf30Q96M34 536 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 LENG8Q96PV6 779 aaPredicted RBP10.81□□□□□ -0.68
GGPS1-201ENST00000282841 ERVK-6Q9BXR3 956 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 TFB2MQ9H5Q4 396 aaKnown RBP10.81□□□□□ -0.68
GGPS1-201ENST00000282841 MID2Q9UJV3 735 aa10.81□□□□□ -0.68
GGPS1-201ENST00000282841 WNT9AO14904 365 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 AXIN1O15169 862 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 TSPAN6O43657 245 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 SNX2O60749 519 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 ATP6V1G1O75348 118 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 CDK14O94921 469 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 UNC5CO95185 931 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 PAPLNO95428 1278 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 ATP1B2P14415 290 aaPredicted RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 DRD3P35462 400 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 HSPA7P48741 367 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 TFF2Q03403 129 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 ABRQ12979 859 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 GPR33Q49SQ1 333 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 HENMT1Q5T8I9 393 aaKnown RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 SBSNQ6UWP8 590 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 TECPR1Q7Z6L1 1165 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 NKAPQ8N5F7 415 aaKnown RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 RASGEF1AQ8N9B8 481 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 UCMAQ8WVF2 138 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 PYCR2Q96C36 320 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 SLC7A6OSQ96CW6 309 aaPredicted RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 DCUN1D1Q96GG9 259 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 TTC1Q99614 292 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 NRTNQ99748 197 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 EGFL8Q99944 293 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 OR2AG1Q9H205 316 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 SAR1AQ9NR31 198 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 OBP2AQ9NY56 170 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 CORO1CQ9ULV4 474 aaPredicted RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 HDAC3O15379 428 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 SGTAO43765 313 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 MSH3P20585 1137 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 BMP8BP34820 402 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 BTKQ06187 659 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 PRKAA1Q13131 559 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 EIF4HQ15056 248 aaKnown RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 ZNF284Q2VY69 593 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 CRTC3Q6UUV7 619 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 ERN2Q76MJ5 926 aaKnown RBP10.8□□□□□ -0.68
GGPS1-201ENST00000282841 PLPP6Q8IY26 295 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 ELMO1Q92556 727 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 INPP5DQ92835 1189 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 KCNK12Q9HB15 430 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 FZD3Q9NPG1 666 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 TCF7L2Q9NQB0 619 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 PACSIN3Q9UKS6 424 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 PIAS3Q9Y6X2 628 aa10.8□□□□□ -0.68
GGPS1-201ENST00000282841 AGAP14A8MT82 685 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 SPECC1L-ADORA2AF8WAN1 911 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 PAK4O96013 591 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 SOD1P00441 154 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 PCCBP05166 539 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 LINC00032P0C843 101 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 COL9A1P20849 921 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 ITGB7P26010 798 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 PDHA2P29803 388 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CTHP32929 405 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 SKIV2L2P42285 1042 aaKnown RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 RBBP7Q16576 425 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 HDDC3Q8N4P3 179 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 UTP4Q969X6 686 aaKnown RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 MIPEPQ99797 713 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 LGR4Q9BXB1 951 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 POPDC3Q9HBV1 291 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms