RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SLC1A2P43004 574 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 MAGEA11P43364 429 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 SLC12A2P55011 1212 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 TRAF2Q12933 501 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 MAPRE1Q15691 268 aaKnown RBP10.21□□□□□ -0.77
UPF3B-201ENST00000276201 DDR2Q16832 855 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 ZNF678Q5SXM1 525 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 PM20D1Q6GTS8 502 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 SPATA19Q7Z5L4 167 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 SPPL2CQ8IUH8 684 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 ZC3H7AQ8IWR0 971 aaKnown RBP10.21□□□□□ -0.77
UPF3B-201ENST00000276201 RIMKLAQ8IXN7 391 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 PIK3C3Q8NEB9 887 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 FKBP10Q96AY3 582 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 LRRC58Q96CX6 371 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 AURKBQ96GD4 344 aaPredicted RBP10.21□□□□□ -0.77
UPF3B-201ENST00000276201 ALPK1Q96QP1 1244 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 IL12RB2Q99665 862 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 BDH2Q9BUT1 245 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 NAA50Q9GZZ1 169 aaKnown RBP10.21□□□□□ -0.77
UPF3B-201ENST00000276201 HMG20AQ9NP66 347 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 TNFRSF12AQ9NP84 129 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 ACSS2Q9NR19 701 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 TRNAU1APQ9NX07 287 aaKnown RBP10.21□□□□□ -0.77
UPF3B-201ENST00000276201 SFMBT1Q9UHJ3 866 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 CORINQ9Y5Q5 1042 aa10.21□□□□□ -0.77
UPF3B-201ENST00000276201 TMX2-CTNND1H3BSU7 103 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 ANGPT2O15123 496 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 TULP3O75386 442 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 PAPSS2O95340 614 aaPredicted RBP10.21□□□□□ -0.78
UPF3B-201ENST00000276201 ZNF182P17025 639 aaPredicted RBP10.21□□□□□ -0.78
UPF3B-201ENST00000276201 BDNFP23560 247 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 RPL10P27635 214 aaKnown RBP10.21□□□□□ -0.78
UPF3B-201ENST00000276201 ADORA2BP29275 332 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 VEPH1Q14D04 833 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 SMAD1Q15797 465 aaKnown RBP10.21□□□□□ -0.78
UPF3B-201ENST00000276201 TRIM16LQ309B1 348 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 ARL13BQ3SXY8 428 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 DEPDC1Q5TB30 811 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 KANK2Q63ZY3 851 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 ITIH5Q86UX2 942 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 PIGZQ86VD9 579 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 ANKRD13BQ86YJ7 626 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 TP53INP2Q8IXH6 220 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 NPWQ8N729 165 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 ABHD11Q8NFV4 315 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 SH3YL1Q96HL8 342 aaPredicted RBP10.21□□□□□ -0.78
UPF3B-201ENST00000276201 HPS4Q9NQG7 708 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 PIGVQ9NUD9 493 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 TMEM30AQ9NV96 361 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 AURKCQ9UQB9 309 aa10.21□□□□□ -0.78
UPF3B-201ENST00000276201 KRBA1A5PL33 1030 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 CLDN5O00501 218 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 ZNF197O14709 1029 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 KATNA1O75449 491 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 EEDO75530 441 aaKnown RBP10.2□□□□□ -0.78
UPF3B-201ENST00000276201 ALBP02768 609 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 PRR35P0CG20 571 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 HMGA1P17096 107 aaKnown RBP10.2□□□□□ -0.78
UPF3B-201ENST00000276201 GJA1P17302 382 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 TPH1P17752 444 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 ITIH1P19827 911 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 CAPN3P20807 821 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 GSK3BP49841 420 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 ALDH3A2P51648 485 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 SEPT6Q14141 434 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 UNC50Q53HI1 259 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 GALNT18Q6P9A2 607 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 GAREM2Q75VX8 874 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 CYP2U1Q7Z449 544 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 DENND6AQ8IWF6 608 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 SCN4BQ8IWT1 228 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 ST13P5Q8NFI4 369 aaPredicted RBP10.2□□□□□ -0.78
UPF3B-201ENST00000276201 USP33Q8TEY7 942 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 MUL1Q969V5 352 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 FEM1AQ9BSK4 669 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 EPHX3Q9H6B9 360 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 AKTIPQ9H8T0 292 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 FANCEQ9HB96 536 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 ARNT2Q9HBZ2 717 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 GLOD4Q9HC38 313 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 USE1Q9NZ43 259 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 ENPP5Q9UJA9 477 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 PCDHGB1Q9Y5G3 927 aa10.2□□□□□ -0.78
UPF3B-201ENST00000276201 A0A1W2PP18 115 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 ANHXE9PGG2 379 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 FAM72CH0Y354 149 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 UBFD1O14562 309 aaKnown RBP10.19□□□□□ -0.78
UPF3B-201ENST00000276201 CDH1P12830 882 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 ZNF24P17028 368 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 NPR3P17342 541 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 HOXB6P17509 224 aaKnown RBP10.19□□□□□ -0.78
UPF3B-201ENST00000276201 LBPP18428 481 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 S100A1P23297 94 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 CRHBPP24387 322 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 OXTRP30559 389 aa10.19□□□□□ -0.78
UPF3B-201ENST00000276201 POLR2IP36954 125 aaKnown RBP10.19□□□□□ -0.78
UPF3B-201ENST00000276201 HNRNPFP52597 415 aaKnown RBP10.19□□□□□ -0.78
UPF3B-201ENST00000276201 HERVK_113P63132 956 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms