RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 EPCAMP16422 314 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 PVALBP20472 110 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 AQP1P29972 269 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 MSX2P35548 267 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 PTPN9P43378 593 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 OR3A3P47888 321 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 OR3A2P47893 321 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 PDX1P52945 283 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 MAPK12P53778 367 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 C2orf80Q0P641 193 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 FAAH2Q6GMR7 532 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 SLC30A10Q6XR72 485 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 OR4C6Q8NH72 309 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 NXPE2Q96DL1 559 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ART5Q96L15 291 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 TREM1Q9NP99 234 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF282Q9UDV7 671 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 PHF24Q9UPV7 400 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 I3L521 148 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CCRL2O00421 344 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ENTPD6O75354 484 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 MAFO75444 373 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 KAT7O95251 611 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 IL1R1P14778 569 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 PBX1P40424 430 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 KHKP50053 298 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 RAB12Q6IQ22 244 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 MED27Q6P2C8 311 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 LSM14AQ8ND56 463 aaKnown RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 STYXQ8WUJ0 223 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 PRMT6Q96LA8 375 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 DUSP16Q9BY84 665 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CHIAQ9BZP6 476 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 TRPV4Q9HBA0 871 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CUEDC1Q9NWM3 386 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 EME2A4GXA9 379 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CACNB4O00305 520 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 NUAK1O60285 661 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ATG13O75143 517 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 FSHRP23945 695 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CCNCP24863 283 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF155Q12901 538 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 SLC9B1Q4ZJI4 515 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 TPGS1Q6ZTW0 290 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CREB3L1Q96BA8 519 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 NSMCE3Q96MG7 304 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF285Q96NJ3 590 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ITPAQ9BY32 194 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 COMMD3Q9UBI1 195 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 USP20Q9Y2K6 914 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 KDM6BO15054 1643 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 POLR1AO95602 1720 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 DAPL1A0PJW8 107 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 FAM234BA2RU67 622 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 DNM1LO00429 736 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CELF2O95319 508 aaKnown RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CLUP10909 449 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 GNALP38405 381 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 GBX2P52951 348 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CERCAMQ5T4B2 595 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 IQSEC1Q6DN90 963 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF517Q6ZMY9 492 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CPT1BQ92523 772 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ITFG2Q969R8 447 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 POLR2J2Q9GZM3 115 aaKnown RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 ABCG8Q9H221 673 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 RGS17Q9UGC6 210 aaPredicted RBP8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 CAMSAP1Q5T5Y3 1602 aa8.61□□□□□ -1.03
SCUBE3-201ENST00000274938 DLC1Q96QB1 1528 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 A0A0U1RQJ8 604 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TBC1D3BA6NDS4 549 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 DCLK1O15075 740 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZNF208O43345 1280 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CLDN11O75508 207 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SLC25A14O95258 325 aaPredicted RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 AP2A1O95782 977 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 STOMP27105 288 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 AKT2P31751 481 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 PRR5P85299 388 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 VMACQ2NL98 169 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 COLEC12Q5KU26 742 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 OGFOD2Q6N063 350 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 DCLRE1AQ6PJP8 1040 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 FAM151BQ6UXP7 276 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GALNT7Q86SF2 657 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CMTR2Q8IYT2 770 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 LINC00471Q8N535 108 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 SLC13A3Q8WWT9 602 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZFP3Q96NJ6 502 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GBA3Q9H227 469 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 IL17RBQ9NRM6 502 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 ZSCAN5BA6NJL1 495 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 CYP11A1P05108 521 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 LINGO3P0C6S8 592 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 GSTT2P0CG29 244 aa8.6□□□□□ -1.03
SCUBE3-201ENST00000274938 PGAM2P15259 253 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms