RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 VPS26AO75436 327 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 ALDOAP04075 364 aaKnown RBP16.91■□□□□ 0.3
SKP2-201ENST00000274254 ACP5P13686 325 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 AOAHP28039 575 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 SKIV2L2P42285 1042 aaKnown RBP16.91■□□□□ 0.3
SKP2-201ENST00000274254 RXRGP48443 463 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 DNAJC3Q13217 504 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 USP10Q14694 798 aaKnown RBP16.91■□□□□ 0.3
SKP2-201ENST00000274254 PLA2G4EQ3MJ16 856 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 CEP85LQ5SZL2 805 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 TIFABQ6ZNK6 161 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 CROCCP2Q86T23 111 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 PIM3Q86V86 326 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 CEP97Q8IW35 865 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 CYP4X1Q8N118 509 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 CD200R1Q8TD46 325 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 ELF4Q99607 663 aaPredicted RBP16.91■□□□□ 0.3
SKP2-201ENST00000274254 SLC30A3Q99726 388 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 SLC13A1Q9BZW2 595 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 ZDHHC5Q9C0B5 715 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 CAB39LQ9H9S4 337 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 FSCN3Q9NQT6 498 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 APOBEC3BQ9UH17 382 aaKnown RBP16.91■□□□□ 0.3
SKP2-201ENST00000274254 DHRS7Q9Y394 339 aa16.91■□□□□ 0.3
SKP2-201ENST00000274254 ZFC3H1O60293 1989 aaKnown RBP16.9■□□□□ 0.3
SKP2-201ENST00000274254 LAMA1P25391 3075 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 TRIM49D1C9J1S8 452 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 KPNA5O15131 536 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 WISP3O95389 354 aaPredicted RBP16.9■□□□□ 0.3
SKP2-201ENST00000274254 STMN1P16949 149 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 PBLDP30039 288 aaPredicted RBP16.9■□□□□ 0.3
SKP2-201ENST00000274254 MAGEA12P43365 314 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 CLCNKAP51800 687 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 PGGT1BP53609 377 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 HNRNPKP61978 463 aaKnown RBP eCLIP16.9■□□□□ 0.3
SKP2-201ENST00000274254 IRX4P78413 519 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 CTBSQ01459 385 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 GBX1Q14549 363 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 TMED2Q15363 201 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 CCDC6Q16204 474 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 INSCQ1MX18 579 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 ZNF423Q2M1K9 1284 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 KRT71Q3SY84 523 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 PRAMEF14Q5SWL7 426 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 UGT3A1Q6NUS8 523 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 OTOAQ7RTW8 1153 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 SIDT2Q8NBJ9 832 aaKnown RBP16.9■□□□□ 0.3
SKP2-201ENST00000274254 HM13Q8TCT9 377 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 GPBAR1Q8TDU6 330 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 ELMO1Q92556 727 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 TSPAN17Q96FV3 270 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 LRRC61Q9BV99 259 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 POPDC3Q9HBV1 291 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 CDYLQ9Y232 598 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 PLEKHM1Q9Y4G2 1056 aa16.9■□□□□ 0.3
SKP2-201ENST00000274254 RALGAPA1Q6GYQ0 2036 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SLC5A10A0PJK1 596 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 H3BM21 787 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 AGPSO00116 658 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 ARHGAP33O14559 1287 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 LIN7AO14910 233 aaPredicted RBP16.89■□□□□ 0.29
SKP2-201ENST00000274254 GPC4O75487 556 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SASH3O75995 380 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 VCLP18206 1134 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SAT1P21673 171 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SERPINB8P50452 374 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SLC12A2P55011 1212 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 RAB10P61026 200 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 NFE2L1Q14494 772 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SHBQ15464 509 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 PRRT3Q5FWE3 981 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 METRNLQ641Q3 311 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 IL27RAQ6UWB1 636 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 NAPRTQ6XQN6 538 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 FAM83HQ6ZRV2 1179 aaPredicted RBP16.89■□□□□ 0.29
SKP2-201ENST00000274254 CMC1Q7Z7K0 106 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 NRROSQ86YC3 692 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SPNS2Q8IVW8 549 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 ZBTB2Q8N680 514 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 LILRA3Q8N6C8 439 aaPredicted RBP16.89■□□□□ 0.29
SKP2-201ENST00000274254 CCL4L1Q8NHW4 92 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 ASZ1Q8WWH4 475 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 INPP5DQ92835 1189 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 NUSAP1Q9BXS6 441 aaKnown RBP16.89■□□□□ 0.29
SKP2-201ENST00000274254 SMOC1Q9H4F8 434 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 COG4Q9H9E3 785 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 SARS2Q9NP81 518 aaKnown RBP16.89■□□□□ 0.29
SKP2-201ENST00000274254 SNX15Q9NRS6 342 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 KLC4Q9NSK0 619 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.89■□□□□ 0.29
SKP2-201ENST00000274254 TRMT6Q9UJA5 497 aaKnown RBP16.89■□□□□ 0.29
SKP2-201ENST00000274254 GMEB2Q9UKD1 530 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 KCNK6Q9Y257 313 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 DNAJC16Q9Y2G8 782 aa16.89■□□□□ 0.29
SKP2-201ENST00000274254 ARHGEF17Q96PE2 2063 aaPredicted RBP16.88■□□□□ 0.29
SKP2-201ENST00000274254 TPP1O14773 563 aa16.88■□□□□ 0.29
SKP2-201ENST00000274254 KHNYNO15037 678 aaKnown RBP16.88■□□□□ 0.29
SKP2-201ENST00000274254 DFNA5O60443 496 aa16.88■□□□□ 0.29
SKP2-201ENST00000274254 SLCO2B1O94956 709 aa16.88■□□□□ 0.29
SKP2-201ENST00000274254 LMNAP02545 664 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms