RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 H0YJX3 145 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF208O43345 1280 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 NME6O75414 186 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 PRAMEF1O95521 474 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 RAP2AP10114 183 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 PTPRAP18433 802 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 HOXC12P31275 282 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CDKN2BP42772 138 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 LIMK2P53671 638 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TEX44Q53QW1 395 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 USP30Q70CQ3 517 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 IQCKQ8N0W5 287 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 LINC00471Q8N535 108 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF433Q8N7K0 673 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 LSM14AQ8ND56 463 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SMG7Q92540 1137 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SPOCK2Q92563 424 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 C12orf4Q9NQ89 552 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 FAM234BA2RU67 622 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF3P17036 446 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 RHOQP17081 205 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 HDCP19113 662 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 STXBP1P61764 594 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 NUP54Q7Z3B4 507 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TLCD1Q96CP7 247 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CSPG4P5Q96PW8 444 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CPA4Q9UI42 421 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CLEC4AQ9UMR7 237 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CXCR6O00574 342 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TLX3O43711 291 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CCNCP24863 283 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ACSL1P33121 698 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF132P52740 706 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 MCCD1P59942 119 aaPredicted RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 ARPC4P59998 168 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 RPL7AP62424 266 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CBLBQ13191 982 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 EIF5AL1Q6IS14 154 aaKnown RBP7.89□□□□□ -1.15
LIMD1-201ENST00000273317 MSANTD1Q6ZTZ1 278 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SYNPOQ8N3V7 929 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 NATD1Q8N6N6 113 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TTLQ8NG68 377 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CERKQ8TCT0 537 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 SLC25A51Q9H1U9 297 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 CXorf21Q9HAI6 301 aa7.89□□□□□ -1.15
LIMD1-201ENST00000273317 TSPAN4O14817 238 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PTPN9P43378 593 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ACADVLP49748 655 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 FOXM1Q08050 763 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PLEKHG6Q3KR16 790 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 KLHL26Q53HC5 615 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CHRDL2Q6WN34 429 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 GPC2Q8N158 579 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 OR5T3Q8NGG3 340 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 NR4A3Q92570 626 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 P2RX7Q99572 595 aaKnown RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PMF1-BGLAPU3KQ54 211 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 SCN2BO60939 215 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 HMGN1P05114 100 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ABCA11PQ4W5N1 156 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ANO7Q6IWH7 933 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 MED27Q6P2C8 311 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CLIP3Q96DZ5 547 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 P2RY11Q96G91 374 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 SDCBP2Q9H190 292 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CDT1Q9H211 546 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF282Q9UDV7 671 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ARFGEF2Q9Y6D5 1785 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 TMEM150BA6NC51 233 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 MOXD2PA6NHM9 499 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CYB5AP00167 134 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 MAGP20916 626 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 DDX6P26196 483 aaKnown RBP eCLIP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 UGT1A3P35503 534 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 MAPK12P53778 367 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 RHBDF2Q6PJF5 856 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 KCTD8Q6ZWB6 473 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ECHDC2Q86YB7 292 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 SLC22A17Q8WUG5 538 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 TUBGCP5Q96RT8 1024 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 TUBA1BP68363 451 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 MVKQ03426 396 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 IQCCQ4KMZ1 466 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 EARS2Q5JPH6 523 aaKnown RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 TUBA1AQ71U36 451 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 OR8H3Q8N146 312 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ZC3H10Q96K80 434 aaKnown RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 FCRL2Q96LA5 508 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 TTPALQ9BTX7 342 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 MND1Q9BWT6 205 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ASF1AQ9Y294 204 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 IL1BP01584 269 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 PRH1P02810 166 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 CLUP10909 449 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 DCKP27707 260 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 SLC6A4P31645 630 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 SLC9A4Q6AI14 798 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 XKRXQ6PP77 449 aa7.88□□□□□ -1.15
LIMD1-201ENST00000273317 TTC29Q8NA56 475 aaPredicted RBP7.88□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF570Q96NI8 536 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms