RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 B4DGG1 531 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 TRAFD1O14545 582 aaPredicted RBP9.64□□□□□ -0.87
LRTM1-201ENST00000273286 CCNB1P14635 433 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 ERCC2P18074 760 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 PTMSP20962 102 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 CDK11BP21127 795 aaKnown RBP9.64□□□□□ -0.87
LRTM1-201ENST00000273286 PSMA2P25787 234 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 STAT5AP42229 794 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 GPR3P46089 330 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 SCNN1BP51168 640 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 RALGDSQ12967 914 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 BIRC2Q13490 618 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 MAMLD1Q13495 774 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 ZNF235Q14590 738 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 SPECC1LQ69YQ0 1117 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 PLEKHA7Q6IQ23 1121 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 PNCKQ6P2M8 343 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 RBM43Q6ZSC3 357 aaKnown RBP9.64□□□□□ -0.87
LRTM1-201ENST00000273286 STK32CQ86UX6 486 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 NDUFAF2Q8N183 169 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 RCBTB1Q8NDN9 531 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 NSMCE1Q8WV22 266 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 OR1E3Q8WZA6 343 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 NUS1Q96E22 293 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 CELF6Q96J87 481 aaKnown RBP9.64□□□□□ -0.87
LRTM1-201ENST00000273286 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.64□□□□□ -0.87
LRTM1-201ENST00000273286 TMEM168Q9H0V1 697 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 SCINQ9Y6U3 715 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 RNF215Q9Y6U7 377 aa9.64□□□□□ -0.87
LRTM1-201ENST00000273286 TLN1Q9Y490 2541 aaKnown RBP9.63□□□□□ -0.87
LRTM1-201ENST00000273286 TENM4Q6N022 2769 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 PMS2P1A4D2B8 440 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 RHPN2P1A8MT19 583 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 STMND1H3BQB6 276 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 PYGLP06737 847 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 CYP2A6P11509 494 aaPredicted RBP9.63□□□□□ -0.87
LRTM1-201ENST00000273286 GZMAP12544 262 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 TNFAIP3P21580 790 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 SERPINB6P35237 376 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 CSRP3P50461 194 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 GFRA1P56159 465 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 ITGA1P56199 1179 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 ACOX1Q15067 660 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 STX1AQ16623 288 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 C17orf82Q86X59 251 aaPredicted RBP9.63□□□□□ -0.87
LRTM1-201ENST00000273286 LRRC49Q8IUZ0 686 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 RAVER1Q8IY67 606 aaKnown RBP9.63□□□□□ -0.87
LRTM1-201ENST00000273286 PLA2G15Q8NCC3 412 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 YIPF4Q9BSR8 244 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 SNRNP25Q9BV90 132 aaKnown RBP9.63□□□□□ -0.87
LRTM1-201ENST00000273286 TEX101Q9BY14 249 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 CDH19Q9H159 772 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 MRPL47Q9HD33 250 aaKnown RBP9.63□□□□□ -0.87
LRTM1-201ENST00000273286 HAUS2Q9NVX0 235 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 MOSPD1Q9UJG1 213 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 DNPEPQ9ULA0 475 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 PHTF1Q9UMS5 762 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 PCDHGA3Q9Y5H0 932 aa9.63□□□□□ -0.87
LRTM1-201ENST00000273286 SCN8AQ9UQD0 1980 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 PRAMEF33A0A0G2JMD5 474 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 TMEM191CA6NGB0 347 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 DFFAO00273 331 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 HTRA2O43464 458 aaPredicted RBP9.62□□□□□ -0.87
LRTM1-201ENST00000273286 PRAMEF10O60809 474 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 MYBL1P10243 752 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 HGFP14210 728 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 ITIH1P19827 911 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 MAN1A1P33908 653 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 PCK1P35558 622 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 RGRP47804 291 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 CDH6P55285 790 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 B4GALNT1Q00973 533 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 DPTQ07507 201 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 NFATC3Q12968 1075 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 SQSTM1Q13501 440 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 PPP6R3Q5H9R7 873 aaPredicted RBP9.62□□□□□ -0.87
LRTM1-201ENST00000273286 PHF19Q5T6S3 580 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 USP45Q70EL2 814 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 ARHGAP12Q8IWW6 846 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 Q8N9G6 341 aaPredicted RBP9.62□□□□□ -0.87
LRTM1-201ENST00000273286 DTD2Q96FN9 168 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 SCRN2Q96FV2 425 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 COQ10AQ96MF6 247 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 NUDCD1Q96RS6 583 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 ASPSCR1Q9BZE9 553 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 ADNPQ9H2P0 1102 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 MRPL40Q9NQ50 206 aaKnown RBP9.62□□□□□ -0.87
LRTM1-201ENST00000273286 STARD5Q9NSY2 213 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 B4GALT6Q9UBX8 382 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 ANKRD36A6QL64 1941 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 MAST4O15021 2626 aa9.62□□□□□ -0.87
LRTM1-201ENST00000273286 ARHGEF17Q96PE2 2063 aaPredicted RBP9.62□□□□□ -0.87
LRTM1-201ENST00000273286 TEX33O43247 280 aa9.61□□□□□ -0.87
LRTM1-201ENST00000273286 PPFIA2O75334 1257 aa9.61□□□□□ -0.87
LRTM1-201ENST00000273286 HEXIM1O94992 359 aaKnown RBP9.61□□□□□ -0.87
LRTM1-201ENST00000273286 IVLP07476 585 aa9.61□□□□□ -0.87
LRTM1-201ENST00000273286 CR2P20023 1033 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms