RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SLC47A2Q86VL8 602 aa13.13□□□□□ -0.31
PRDM16-201ENST00000270722 TOP6BLQ8N6T0 577 aa13.13□□□□□ -0.31
PRDM16-201ENST00000270722 CORO2AQ92828 525 aa13.13□□□□□ -0.31
PRDM16-201ENST00000270722 DNASE1L2Q92874 299 aa13.13□□□□□ -0.31
PRDM16-201ENST00000270722 MRIQ9BWK5 157 aa13.13□□□□□ -0.31
PRDM16-201ENST00000270722 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
PRDM16-201ENST00000270722 M0R129 80 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 GABBR2O75899 941 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 IL18Q14116 193 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 HEPACAMQ14CZ8 416 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 GUK1Q16774 197 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 MINDY4Q4G0A6 757 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 P4HA3Q7Z4N8 544 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 SYVN1Q86TM6 617 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 PIWIL2Q8TC59 973 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 GPRC5CQ9NQ84 441 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 DNAJB4Q9UDY4 337 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 SAMHD1Q9Y3Z3 626 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 NR2E1Q9Y466 385 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 HSPB11Q9Y547 144 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 TTC3P53804 2025 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RGS19P49795 217 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 KCNA10Q16322 511 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RIOX1Q9H6W3 641 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 GAREM1Q9H706 876 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 LACTBL1A8MY62 500 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 MBP02144 154 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 ZNF823P16415 610 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 OR2B6P58173 313 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 LRRC32Q14392 662 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 PIK3R6Q5UE93 754 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 KANSL1Q7Z3B3 1105 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 CCDC107Q8WV48 283 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 DNAJA4Q8WW22 397 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 SAGE1Q9NXZ1 904 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 MAT2BQ9NZL9 334 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 MAGEL2Q9UJ55 1249 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RLN2P04090 185 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 DCST1Q5T197 706 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 ZNF398Q8TD17 642 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RNASEH2AO75792 299 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 SLC7A1P30825 629 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 CXCL9Q07325 125 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 TMC3Q7Z5M5 1100 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 CPNE9Q8IYJ1 553 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 WFIKKN2Q8TEU8 576 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 HGFP14210 728 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 TIE1P35590 1138 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RARRES1P49788 294 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RGS8P57771 180 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 TSEN15Q8WW01 171 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 CLPTM1LQ96KA5 538 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 SEMA3CQ99985 751 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RCOR3Q9P2K3 495 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 ALKQ9UM73 1620 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RAB19A4D1S5 217 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 NKX6-1P78426 367 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 OVGP1Q12889 678 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 RAPSNQ13702 412 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 ZCCHC9Q8N567 271 aaKnown RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 TMEM121BQ9BXQ6 578 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-201ENST00000270722 C14orf105Q9NVL8 296 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 DHRS7Q9Y394 339 aa13.12□□□□□ -0.31
PRDM16-201ENST00000270722 CELF3Q5SZQ8 465 aaKnown RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CAVIN3Q969G5 261 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ALKBH4Q9NXW9 302 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ALAS2P22557 587 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 GRK6P43250 576 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 HCAR3P49019 387 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SEC24CP53992 1094 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ACTR1AP61163 376 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 BDH1Q02338 343 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 BHLHE41Q9C0J9 482 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ATE1O95260 518 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 YBEYP58557 167 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 RAB10P61026 200 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 PGM2L1Q6PCE3 622 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ASCC1Q8N9N2 400 aaKnown RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 POF1BQ8WVV4 589 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CASKIN2Q8WXE0 1202 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CERS2Q96G23 380 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CSPG4P5Q96PW8 444 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ULBP1Q9BZM6 244 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 KCNN3Q9UGI6 736 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 VEGFDO43915 354 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 RNF151Q2KHN1 245 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms