RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 RDH14Q9HBH5 336 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 HPS4Q9NQG7 708 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 STX18Q9P2W9 335 aaKnown RBP16.36■□□□□ 0.21
CCDC40-201ENST00000269318 DEC1Q9P2X7 70 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 SUN2Q9UH99 717 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 SARDHQ9UL12 918 aa16.36■□□□□ 0.21
CCDC40-201ENST00000269318 PIKFYVEQ9Y2I7 2098 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 EIF3FO00303 357 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 OR7A17O14581 309 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 TBX10O75333 385 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 VPS4BO75351 444 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 CRCPO75575 148 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 S100BP04271 92 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 ATP1B2P14415 290 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 VCLP18206 1134 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 MAPRE2Q15555 327 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 POM121L1PQ3SYA9 428 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 AGKQ53H12 422 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 LETMD1Q6P1Q0 360 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 GPR149Q86SP6 731 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 TRAM1L1Q8N609 369 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 EFCAB3Q8N7B9 438 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 NPAS2Q99743 824 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 NKX2-4Q9H2Z4 354 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 NOL11Q9H8H0 719 aaKnown RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 NDE1Q9NXR1 346 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 CCDC167Q9P0B6 97 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 KIF26AQ9ULI4 1882 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 POMPQ9Y244 141 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 FBP2O00757 339 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 SGTAO43765 313 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 OR4F21O95013 312 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 GUCA1CO95843 209 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 ENO3P13929 434 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 GCKP35557 465 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 DPP6P42658 865 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 GTF2H2Q13888 395 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 EIF4HQ15056 248 aaKnown RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 SWT1Q5T5J6 900 aaKnown RBP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 C9orf64Q5T6V5 341 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 OGFOD2Q6N063 350 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 GTF2H2CQ6P1K8 395 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 FUNDC1Q8IVP5 155 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCDC40-201ENST00000269318 OR9I1Q8NGQ6 314 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 UBTD2Q8WUN7 234 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 RHBDF1Q96CC6 855 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 TUBGCP3Q96CW5 907 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 CDK15Q96Q40 435 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 TMEM79Q9BSE2 394 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 APOL5Q9BWW9 433 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 RAD18Q9NS91 495 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 C15orf41Q9Y2V0 281 aa16.35■□□□□ 0.21
CCDC40-201ENST00000269318 FADS2P1A8MWK0 482 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 SPINT1O43278 529 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 SNRPB2P08579 225 aaKnown RBP16.34■□□□□ 0.21
CCDC40-201ENST00000269318 LBPP18428 481 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 XPAP23025 273 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-201ENST00000269318 PTDSS1P48651 473 aaKnown RBP16.34■□□□□ 0.21
CCDC40-201ENST00000269318 HSPA7P48741 367 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 STX5Q13190 355 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 CCNIQ14094 377 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 PDGFRLQ15198 375 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 HNRNPA1L2Q32P51 320 aaKnown RBP16.34■□□□□ 0.21
CCDC40-201ENST00000269318 TANGO2Q6ICL3 276 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 SULT1C3Q6IMI6 304 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 PAOXQ6QHF9 649 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 LIPIQ6XZB0 460 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 DET1Q7L5Y6 550 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 SFTPA1Q8IWL2 248 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 SNX31Q8N9S9 440 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 DDHD1Q8NEL9 900 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 CCDC124Q96CT7 223 aaKnown RBP16.34■□□□□ 0.21
CCDC40-201ENST00000269318 ACOX2Q99424 681 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 ZSCAN5AQ9BUG6 496 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 RIOK2Q9BVS4 552 aaKnown RBP16.34■□□□□ 0.21
CCDC40-201ENST00000269318 WDR41Q9HAD4 459 aa16.34■□□□□ 0.21
CCDC40-201ENST00000269318 GIPC1O14908 333 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 NUAK1O60285 661 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 MTX2O75431 263 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 CHEK2O96017 543 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 PRNPP04156 253 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 HLA-EP13747 358 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 HGFP14210 728 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 AKT1P31749 480 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 METAP1P53582 386 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 STX1BP61266 288 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 SLC34A1Q06495 639 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 TRAF3Q13114 568 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 ART3Q13508 389 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 LRP8Q14114 963 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 GRIN2CQ14957 1233 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 PIGGQ5H8A4 983 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 PPP2R2DQ66LE6 453 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 METTL2BQ6P1Q9 378 aaKnown RBP16.33■□□□□ 0.21
CCDC40-201ENST00000269318 VITQ6UXI7 678 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 SERPINA13PQ6UXR4 307 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 BNC2Q6ZN30 1099 aaPredicted RBP16.33■□□□□ 0.21
CCDC40-201ENST00000269318 CDYL2Q8N8U2 506 aa16.33■□□□□ 0.21
CCDC40-201ENST00000269318 DCBLD1Q8N8Z6 715 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms