RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 PDZD8Q8NEN9 1154 aa18.8■□□□□ 0.6
CPNE7-201ENST00000268720 CD200R1Q8TD46 325 aa18.8■□□□□ 0.6
CPNE7-201ENST00000268720 ZUFSPQ96AP4 578 aa18.8■□□□□ 0.6
CPNE7-201ENST00000268720 PLD4Q96BZ4 506 aa18.8■□□□□ 0.6
CPNE7-201ENST00000268720 ZFP14Q9HCL3 533 aa18.8■□□□□ 0.6
CPNE7-201ENST00000268720 A0A087WXM4 84 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 UPK3BL1B0FP48 263 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 UPK3BL2E5RIL1 263 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ACOX3O15254 700 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 STX7O15400 261 aaKnown RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 MAN1A2O60476 641 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 SYNCRIPO60506 623 aaKnown RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 EFEMP2O95967 443 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 RPS17P08708 135 aaKnown RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ATP4BP51164 291 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ESRRGP62508 458 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 LRRC73Q5JTD7 316 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ARMC12Q5T9G4 340 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ANKS6Q68DC2 871 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ZNF461Q8TAF7 563 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 TMEM125Q96AQ2 219 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ITCHQ96J02 903 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 HHIPL1Q96JK4 782 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ASB2Q96Q27 587 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 HOPXQ9BPY8 73 aaPredicted RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 CWH43Q9H720 699 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 AASSQ9UDR5 926 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 GPR45Q9Y5Y3 372 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 CCDC154A6NI56 674 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 TCF3P15923 654 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 CD247P20963 164 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 MYF6P23409 242 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ZFP36L2P47974 494 aaKnown RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 CCT8P50990 548 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ATN1P54259 1190 aaPredicted RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 KCNK10P57789 538 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 ERVPABLB-1P60509 514 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 TUBA4AP68366 448 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 HMGCS1Q01581 520 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 LAPTM4AQ15012 233 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 TAF12Q16514 161 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 IL27RAQ6UWB1 636 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 TTC30BQ8N4P2 665 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 CAPNS2Q96L46 248 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 NPLQ9BXD5 320 aaPredicted RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 KLF16Q9BXK1 252 aaPredicted RBP18.79■□□□□ 0.6
CPNE7-201ENST00000268720 FAM8A1Q9UBU6 413 aa18.79■□□□□ 0.6
CPNE7-201ENST00000268720 EYSQ5T1H1 3165 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 E5RI56 91 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 G6PDP11413 515 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 VARSP26640 1264 aaKnown RBP18.78■□□□□ 0.6
CPNE7-201ENST00000268720 SLC36A3Q495N2 470 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 BLOC1S3Q6QNY0 202 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 FAM151BQ6UXP7 276 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 TMEM26Q6ZUK4 368 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 GPR180Q86V85 440 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 MINDY1Q8N5J2 469 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 IGSF21Q96ID5 467 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 MYRFLQ96LU7 910 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 CXorf21Q9HAI6 301 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 SDR39U1Q9NRG7 319 aaPredicted RBP18.78■□□□□ 0.6
CPNE7-201ENST00000268720 ACTR3BQ9P1U1 418 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 POLR3HQ9Y535 204 aaPredicted RBP18.78■□□□□ 0.6
CPNE7-201ENST00000268720 PCDHA9Q9Y5H5 950 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 FADS3Q9Y5Q0 445 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 GBF1Q92538 1859 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 AQP12BA6NM10 295 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 BBIP1A8MTZ0 92 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 H0Y626 953 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 HOXA2O43364 376 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 TBL1XO60907 577 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 CAPN1P07384 714 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 ATP6AP1Q15904 470 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 NANOGP8Q6NSW7 305 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 ELMSAN1Q6PJG2 1045 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 CHST9Q7L1S5 443 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 TMEM150AQ86TG1 271 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 AQP12AQ8IXF9 295 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 ALDH16A1Q8IZ83 802 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 MFSD2AQ8NA29 543 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 FBXO30Q8TB52 745 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 AUTS2Q8WXX7 1259 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 CENPNQ96H22 339 aaPredicted RBP18.78■□□□□ 0.6
CPNE7-201ENST00000268720 ADGRE3Q9BY15 652 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 NANOGQ9H9S0 305 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 POLR1BQ9H9Y6 1135 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 CARS2Q9HA77 564 aaKnown RBP18.78■□□□□ 0.6
CPNE7-201ENST00000268720 LHX3Q9UBR4 397 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 AFF4Q9UHB7 1163 aaKnown RBP18.78■□□□□ 0.6
CPNE7-201ENST00000268720 PCTPQ9UKL6 214 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 YIPF1Q9Y548 306 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 A0A0C4DFX4 3053 aa18.78■□□□□ 0.6
CPNE7-201ENST00000268720 GIPC1O14908 333 aa18.77■□□□□ 0.6
CPNE7-201ENST00000268720 NOBOXO60393 691 aa18.77■□□□□ 0.6
CPNE7-201ENST00000268720 SNX2O60749 519 aa18.77■□□□□ 0.6
CPNE7-201ENST00000268720 VPS26AO75436 327 aa18.77■□□□□ 0.6
CPNE7-201ENST00000268720 HRH2P25021 359 aa18.77■□□□□ 0.6
CPNE7-201ENST00000268720 NFKBIAP25963 317 aa18.77■□□□□ 0.6
CPNE7-201ENST00000268720 SMAD3P84022 425 aaKnown RBP18.77■□□□□ 0.6
CPNE7-201ENST00000268720 ZBED5Q49AG3 693 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms