RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DGKQP52824 942 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 MS4A2Q01362 244 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 NPTX1Q15818 432 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 TYSND1Q2T9J0 566 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 PRR23BQ6ZRT6 265 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 TTC29Q8NA56 475 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 MAPK15Q8TD08 544 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 C1GALT1C1Q96EU7 318 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 CDK15Q96Q40 435 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 GPR22Q99680 433 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 ANKRD36CQ5JPF3 1778 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 PRMT5O14744 637 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 PQBP1O60828 265 aaKnown RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 EDN1P05305 212 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 RAP2AP10114 183 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 HSPA7P48741 367 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 SMAD3P84022 425 aaKnown RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 NIPAL1Q6NVV3 410 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 DIRAS2Q96HU8 199 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 ZNF696Q9H7X3 374 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 TBCCD1Q9NVR7 557 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 SSR3Q9UNL2 185 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 DYRK1BQ9Y463 629 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 OR10H3O60404 316 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 TULP3O75386 442 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 GNPDA1P46926 289 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 CAMK2GQ13555 558 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 PARP15Q460N3 678 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 R3HCC1LQ7Z5L2 792 aaKnown RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 STYXQ8WUJ0 223 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 PIH1D2Q8WWB5 315 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 TADA1Q96BN2 335 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 B3GALT6Q96L58 329 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 IPPKQ9H8X2 491 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 SMURF2Q9HAU4 748 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 CNTN3Q9P232 1028 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 ENOPH1Q9UHY7 261 aa11.42□□□□□ -0.58
VPS33A-201ENST00000267199 ZNF490Q9ULM2 529 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-201ENST00000267199 CNTRLQ7Z7A1 2325 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 C9IYK1 514 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 AURKAO14965 403 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 DENRO43583 198 aaKnown RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 FAM189A1O60320 539 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 TBL1XO60907 577 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PAICSP22234 425 aaKnown RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PAX3P23760 479 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 GCAP28676 217 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 GSTM5P46439 218 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 GJA9P57773 515 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 VBP1P61758 197 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 UGT2A3Q6UWM9 527 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 KBTBD6Q86V97 674 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 ZDHHC21Q8IVQ6 265 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 ARFGAP1Q8N6T3 406 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 ITCHQ96J02 903 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 INTS10Q9NVR2 710 aaKnown RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 GDAP2Q9NXN4 497 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 MOCS1Q9NZB8 636 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 SAMD4AQ9UPU9 718 aaKnown RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 CXCR6O00574 342 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 AP2A2O94973 939 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 HTR7P34969 479 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PTPN5P54829 565 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 ELP6Q0PNE2 266 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 KRT74Q7RTS7 529 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 C16orf62Q7Z3J2 963 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PIM3Q86V86 326 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 SMOQ99835 787 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 DCSTAMPQ9H295 470 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 MUC13Q9H3R2 512 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 SNX6Q9UNH7 406 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 IGKV6D-21A0A0A0MT36 114 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 IQCF5A8MTL0 148 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 FAM72CH0Y354 149 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PRKD3O94806 890 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PBX3P40426 434 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 NDST2P52849 883 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PRKAG1P54619 331 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 OR2B6P58173 313 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 SLC10A7Q0GE19 358 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 FAM72AQ5TYM5 149 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 FAM72DQ6L9T8 149 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 FAM72BQ86X60 149 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 ARMC8Q8IUR7 673 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 PACRGLQ8N7B6 248 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 KCTD13Q8WZ19 329 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 NELL1Q92832 810 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 FCRL3Q96P31 734 aaPredicted RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 KCNA7Q96RP8 456 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 LRRC3Q9BY71 257 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 MRPL9Q9BYD2 267 aaKnown RBP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 RNF38Q9H0F5 515 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 LRTM1Q9HBL6 345 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
VPS33A-201ENST00000267199 ING3Q9NXR8 418 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 RAB23Q9ULC3 237 aa11.41□□□□□ -0.58
VPS33A-201ENST00000267199 TACR2P21452 398 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms