RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CMTM8Q8IZV2 173 aa19.58■□□□□ 0.73
CSPG5-201ENST00000264723 TRPV1Q8NER1 839 aa19.58■□□□□ 0.73
CSPG5-201ENST00000264723 MAGED4Q96JG8 741 aa19.58■□□□□ 0.73
CSPG5-201ENST00000264723 IL12RB2Q99665 862 aa19.58■□□□□ 0.73
CSPG5-201ENST00000264723 UGT2B28Q9BY64 529 aa19.58■□□□□ 0.73
CSPG5-201ENST00000264723 CAPN10Q9HC96 672 aa19.58■□□□□ 0.73
CSPG5-201ENST00000264723 IGSF5Q9NSI5 407 aa19.58■□□□□ 0.73
CSPG5-201ENST00000264723 SNAP29O95721 258 aa19.58■□□□□ 0.72
CSPG5-201ENST00000264723 PPM1AP35813 382 aa19.58■□□□□ 0.72
CSPG5-201ENST00000264723 KCNC1P48547 511 aa19.58■□□□□ 0.72
CSPG5-201ENST00000264723 TMED10P49755 219 aaKnown RBP19.58■□□□□ 0.72
CSPG5-201ENST00000264723 NR1D2Q14995 579 aa19.58■□□□□ 0.72
CSPG5-201ENST00000264723 TBC1D21Q8IYX1 336 aa19.58■□□□□ 0.72
CSPG5-201ENST00000264723 UTP15Q8TED0 518 aaKnown RBP19.58■□□□□ 0.72
CSPG5-201ENST00000264723 CDC14AQ9UNH5 594 aa19.58■□□□□ 0.72
CSPG5-201ENST00000264723 FTH1P02794 183 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 LAG3P18627 525 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 PRDX3P30048 256 aaKnown RBP19.57■□□□□ 0.72
CSPG5-201ENST00000264723 POLD2P49005 469 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 PIGFQ07326 219 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 CBX2Q14781 532 aaPredicted RBP19.57■□□□□ 0.72
CSPG5-201ENST00000264723 CARTPTQ16568 116 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 PLA2G4EQ3MJ16 856 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 SCD5Q86SK9 330 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 RMND5AQ9H871 391 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 INTS7Q9NVH2 962 aaKnown RBP19.57■□□□□ 0.72
CSPG5-201ENST00000264723 PAIP2BQ9ULR5 123 aaKnown RBP19.57■□□□□ 0.72
CSPG5-201ENST00000264723 KIAA1217Q5T5P2 1943 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 TRIP11Q15643 1979 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 WDR47O94967 919 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 ZNF37AP17032 561 aaPredicted RBP19.57■□□□□ 0.72
CSPG5-201ENST00000264723 SNX8Q9Y5X2 465 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 C7orf72A4D263 438 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 BBIP1A8MTZ0 92 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 ZNF195O14628 629 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 CAPN3P20807 821 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 CASP9P55211 416 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 LYSMD3Q7Z3D4 306 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 SYT12Q8IV01 421 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 MFSD6LQ8IWD5 586 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 PYCR2Q96C36 320 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 TSGA13Q96PP4 275 aa19.57■□□□□ 0.72
CSPG5-201ENST00000264723 G3V2T6 193 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 NME4O00746 187 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 CCNA2P20248 432 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 IST1P53990 364 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 TRIM60Q495X7 471 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 CLLU1OSQ5K130 101 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 PM20D1Q6GTS8 502 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 RRM2BQ7LG56 351 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 RAB42Q8N4Z0 105 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 ROPN1LQ96C74 230 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 DYRK1BQ9Y463 629 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 APLP1P51693 650 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 KCTD11Q693B1 232 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 PHACTR4Q8IZ21 702 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 PLGRKTQ9HBL7 147 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 ZNF490Q9ULM2 529 aaPredicted RBP19.56■□□□□ 0.72
CSPG5-201ENST00000264723 TMCO1Q9UM00 188 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 PWP1Q13610 501 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 C18orf21Q32NC0 220 aaPredicted RBP19.56■□□□□ 0.72
CSPG5-201ENST00000264723 NECAB2Q7Z6G3 386 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 RORBQ92753 470 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 CATP04040 527 aaKnown RBP19.56■□□□□ 0.72
CSPG5-201ENST00000264723 BROXQ5VW32 411 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 RAET1GQ6H3X3 334 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 ZCCHC8Q6NZY4 707 aaKnown RBP19.56■□□□□ 0.72
CSPG5-201ENST00000264723 ERMP1Q7Z2K6 904 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 KREMEN2Q8NCW0 462 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 SUSD6Q92537 303 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 IMP4Q96G21 291 aaKnown RBP19.56■□□□□ 0.72
CSPG5-201ENST00000264723 FEM1CQ96JP0 617 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 TNFRSF12AQ9NP84 129 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 PCDH12Q9NPG4 1184 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 CHCHD3Q9NX63 227 aaKnown RBP19.56■□□□□ 0.72
CSPG5-201ENST00000264723 RIMS3Q9UJD0 308 aa19.56■□□□□ 0.72
CSPG5-201ENST00000264723 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 HAS3O00219 553 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 SLC22A2O15244 555 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 OTCP00480 354 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 G6PDP11413 515 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 GPC1P35052 558 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 GALNT18Q6P9A2 607 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 ALKAL1Q6UXT8 129 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 CLEC14AQ86T13 490 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 ZNF461Q8TAF7 563 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 SMURF2Q9HAU4 748 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 SMOXQ9NWM0 555 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 ARIH1Q9Y4X5 557 aaPredicted RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 PLOD2O00469 737 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 LEPRP48357 1165 aaKnown RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 IDH2P48735 452 aaKnown RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 MPPE1Q53F39 396 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 CRTC3Q6UUV7 619 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 UBE2R2Q712K3 238 aaPredicted RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 ZNF296Q8WUU4 475 aaPredicted RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 C12orf43Q96C57 262 aaKnown RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 APOLD1Q96LR9 279 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 PRICKLE1Q96MT3 831 aaPredicted RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 TCF25Q9BQ70 676 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms