RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LOC400499M0QZD8 3231 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 H7C0S8 307 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 CCL22O00626 93 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 LIASO43766 372 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 RALBP11234 206 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 PBLDP30039 288 aaPredicted RBP15.74■□□□□ 0.11
USE1-201ENST00000263897 LEPRP48357 1165 aaKnown RBP15.74■□□□□ 0.11
USE1-201ENST00000263897 RPS6KA1Q15418 735 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 OASLQ15646 514 aaKnown RBP15.74■□□□□ 0.11
USE1-201ENST00000263897 BCL7AQ4VC05 210 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 CEACAM20Q6UY09 585 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 ZNF662Q6ZS27 426 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 LINC00523Q86TU6 105 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 RSC1A1Q92681 617 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 CDKN2AIPNLQ96HQ2 116 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 DNAJC1Q96KC8 554 aaKnown RBP15.74■□□□□ 0.11
USE1-201ENST00000263897 TGM7Q96PF1 710 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 INSM2Q96T92 566 aaPredicted RBP15.74■□□□□ 0.11
USE1-201ENST00000263897 COPS8Q99627 209 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 CTRCQ99895 268 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 RAB33BQ9H082 229 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 PILRAQ9UKJ1 303 aa15.74■□□□□ 0.11
USE1-201ENST00000263897 COL6A6A6NMZ7 2263 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 CFAP46Q8IYW2 2715 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 TRBV5-4A0A0C4DH59 114 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 ERI2A8K979 691 aaKnown RBP15.73■□□□□ 0.11
USE1-201ENST00000263897 CFAP99D6REC4 459 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 C1QL1O75973 258 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 ATP1B2P14415 290 aaPredicted RBP15.73■□□□□ 0.11
USE1-201ENST00000263897 PSMA3P25788 255 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 MC4RP32245 332 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 CAPZBP47756 277 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 CDKN1CP49918 316 aaPredicted RBP15.73■□□□□ 0.11
USE1-201ENST00000263897 ATP1A2P50993 1020 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 POU6F1Q14863 301 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 XKR5Q6UX68 686 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 ZSCAN1Q8NBB4 408 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 GPR150Q8NGU9 434 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 STYXQ8WUJ0 223 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 ZFPM2Q8WW38 1151 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 ZDHHC12Q96GR4 267 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 WWP1Q9H0M0 922 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 ETNK1Q9HBU6 452 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 APMAPQ9HDC9 416 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 SIDT1Q9NXL6 827 aaKnown RBP15.73■□□□□ 0.11
USE1-201ENST00000263897 ZDHHC3Q9NYG2 299 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 ZNF148Q9UQR1 794 aa15.73■□□□□ 0.11
USE1-201ENST00000263897 PIKFYVEQ9Y2I7 2098 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 IGLV3-16A0A075B6K0 115 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 C17orf113A0A1B0GUU1 675 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 MROH6A6NGR9 719 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 POLR1CO15160 346 aaPredicted RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 KIF1CO43896 1103 aaKnown RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 KALRNO60229 2985 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 IFNB1P01574 187 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 POLBP06746 335 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 CCDC175P0C221 793 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 MTHFD1P11586 935 aaKnown RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 WT1P19544 449 aaPredicted RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 FDFT1P37268 417 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 PRLHRP49683 370 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 C19orf57Q0VDD7 668 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 ZRANB3Q5FWF4 1079 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 KLHL35Q6PF15 583 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 TAS2R42Q7RTR8 314 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 SERPINA9Q86WD7 417 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 LRRC8AQ8IWT6 810 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 CFAP206Q8IYR0 622 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 CACNA2D3Q8IZS8 1091 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 IL22RA1Q8N6P7 574 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 KLHL6Q8WZ60 621 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 CCM2Q9BSQ5 444 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 ZNF768Q9H5H4 540 aaKnown RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 LZTFL1Q9NQ48 299 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 IMP3Q9NV31 184 aaKnown RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 PIH1D1Q9NWS0 290 aaKnown RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 PCDHGA4Q9Y5G9 962 aa15.72■□□□□ 0.11
USE1-201ENST00000263897 CFAP20Q9Y6A4 193 aaKnown RBP15.72■□□□□ 0.11
USE1-201ENST00000263897 RAD1O60671 282 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 RASSF9O75901 435 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 ACRV1P26436 265 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 SEPHS1P49903 392 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 CACNG1Q06432 222 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 CDH17Q12864 832 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 SNX1Q13596 522 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 SEPT6Q14141 434 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 LY6DQ14210 128 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 SKIDA1Q1XH10 827 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 CACHD1Q5VU97 1274 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 CAPRIN2Q6IMN6 1127 aaKnown RBP15.71■□□□□ 0.11
USE1-201ENST00000263897 IRGCQ6NXR0 463 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 MICALCLQ6ZW33 695 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 PRSS42Q7Z5A4 293 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 LILRA3Q8N6C8 439 aaPredicted RBP15.71■□□□□ 0.11
USE1-201ENST00000263897 OR52K1Q8NGK4 314 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 C12orf66Q96MD2 445 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 ALS2CR12Q96Q35 445 aa15.71■□□□□ 0.11
USE1-201ENST00000263897 SEMA5BQ9P283 1151 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms