RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TBKBP1A7MCY6 615 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 RAD51BO15315 384 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 CD3EAPO15446 510 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 RGS10O43665 173 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 PEX10O60683 326 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 APBA3O96018 575 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 IL1RNP18510 177 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 OGNP20774 298 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 RCVRNP35243 200 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 MTPNP58546 118 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 LSM3P62310 102 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF45Q02386 682 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 VAC14Q08AM6 782 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 TRAF3Q13114 568 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 GRIK4Q16099 956 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 LRIT3Q3SXY7 679 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 FAM219BQ5XKK7 198 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 LDB1Q86U70 411 aaPredicted RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 KIAA1958Q8N8K9 716 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 IPCEF1Q8WWN9 437 aaPredicted RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF419Q96HQ0 510 aaPredicted RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 AARSD1Q9BTE6 412 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 PCDH12Q9NPG4 1184 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 POLE4Q9NR33 117 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 NPAP1Q9NZP6 1156 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 MARCH4Q9P2E8 410 aaPredicted RBP12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 GJD2Q9UKL4 321 aa12.23□□□□□ -0.45
CHMP2B-201ENST00000263780 ELOVL7A1L3X0 281 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 LCHNA4D1U4 455 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ZBBXA8MT70 800 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 PRMT5O14744 637 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 MAN1A2O60476 641 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 RECQL5O94762 991 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 APOA1P02647 267 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 RETP07949 1114 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 DCTP40126 519 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 DEFA1P59665 94 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 DEFA3P59666 94 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ARPC4P59998 168 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 SLC35A2P78381 396 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ITKQ08881 620 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 KEAP1Q14145 624 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF404Q494X3 552 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 NOMO2Q5JPE7 1267 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF549Q6P9A3 640 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 SYVN1Q86TM6 617 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 HEATR4Q86WZ0 1026 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 TMEM86AQ8N2M4 240 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 CHCHD4Q8N4Q1 142 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 FCGR1BQ92637 280 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 HTRA1Q92743 480 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 PROX1Q92786 737 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 NEK6Q9HC98 313 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 TAS2R13Q9NYV9 303 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 NEU3Q9UQ49 428 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ANKRD34BA5PLL1 514 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 EFCAB9A8MZ26 197 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 XPNPEP2O43895 674 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 CLK1P49759 484 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ARSDP51689 593 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ARHGDIAP52565 204 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 CSNK2BP67870 215 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 IFITM2Q01629 132 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ACVR1Q04771 509 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 PNCKQ6P2M8 343 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 ENPP6Q6UWR7 440 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 NKAPQ8N5F7 415 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 RTL3Q8N8U3 475 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 SMARCD1Q96GM5 515 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 TP63Q9H3D4 680 aaPredicted RBP12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 PDGFCQ9NRA1 345 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 KLK14Q9P0G3 267 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 CDH9Q9ULB4 789 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 GINS2Q9Y248 185 aa12.22□□□□□ -0.45
CHMP2B-201ENST00000263780 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 AGAP5A6NIR3 686 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 H3BRB1 525 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 RHOBTB1O94844 696 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 FKBP9O95302 570 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 IGFBP5P24593 272 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 ALDH4A1P30038 563 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 AKT1P31749 480 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 CCR1P32246 355 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 CD86P42081 329 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 CASP3P42574 277 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 IST1P53990 364 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 SLC13A2Q13183 592 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 MANEALQ5VSG8 457 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 AMER2Q8N7J2 671 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 NAT16Q8N8M0 369 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 THUMPD3Q9BV44 507 aaKnown RBP12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 CRTAC1Q9NQ79 661 aa12.21□□□□□ -0.45
CHMP2B-201ENST00000263780 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms