RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CCT5P48643 541 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 WDR4P57081 412 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 NFE2L1Q14494 772 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 ZNF542PQ5EBM4 170 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 LVRNQ6Q4G3 990 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC36A4Q6YBV0 504 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 FAM83HQ6ZRV2 1179 aaPredicted RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CHST15Q7LFX5 561 aaPredicted RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 OTOAQ7RTW8 1153 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PIWIL4Q7Z3Z4 852 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 ABI3BPQ7Z7G0 1075 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 TBC1D1Q86TI0 1168 aaPredicted RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 LONP2Q86WA8 852 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 RGL4Q8IZJ4 473 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 ARMC2Q8NEN0 867 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 FAM76AQ8TAV0 307 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 DENND1AQ8TEH3 1009 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 OR1E3Q8WZA6 343 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PTERQ96BW5 349 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 LINGO1Q96FE5 620 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PDXPQ96GD0 296 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CABS1Q96KC9 395 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 SCYL1Q96KG9 808 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PKNOX2Q96KN3 472 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PAIP2Q9BPZ3 127 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CCM2Q9BSQ5 444 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 ZCCHC2Q9C0B9 1178 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CYP4F12Q9HCS2 524 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 CPSF2Q9P2I0 782 aaKnown RBP9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 DCDC2Q9UHG0 476 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 GRID1Q9ULK0 1009 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 SUFUQ9UMX1 484 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 DMTF1Q9Y222 760 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 SLC17A4Q9Y2C5 497 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 DNAJC16Q9Y2G8 782 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 PLLPQ9Y342 182 aa9.57□□□□□ -0.88
SNRNP40-201ENST00000263694 ZFC3H1O60293 1989 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 KMT2EQ8IZD2 1858 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CCDC163A0A0D9SF12 145 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 NPEPPSL1A6NEC2 478 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 A6NNZ2 444 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 TK2O00142 265 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 GLRA3O75311 464 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 FTH1P02794 183 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 LTA4HP09960 611 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CD1DP15813 335 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 TFEBP19484 476 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CD9P21926 228 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 ITPKAP23677 461 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 SKIV2L2P42285 1042 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 GNPDA1P46926 289 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 DHPSP49366 369 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 THOP1P52888 689 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 KIAA1024LP59773 190 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 IL2P60568 153 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 NFATC4Q14934 902 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 OR4D1Q15615 310 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 ZNF658BQ4V348 819 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 BCL7AQ4VC05 210 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 UGT3A1Q6NUS8 523 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CYHR1Q6ZMK1 362 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 BMP8AQ7Z5Y6 402 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 LRRTM4Q86VH4 590 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CFAP206Q8IYR0 622 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 FSTL5Q8N475 847 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 TMEM151AQ8N4L1 468 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 OR56A4Q8NGH8 313 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 ALKBH8Q96BT7 664 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 WDR92Q96MX6 357 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 PANX3Q96QZ0 392 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 MECRQ9BV79 373 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 IQCGQ9H095 443 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 DUSP15Q9H1R2 295 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 TCEAL2Q9H3H9 227 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 ALG9Q9H6U8 611 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CARS2Q9HA77 564 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 POPDC3Q9HBV1 291 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 SYTL2Q9HCH5 934 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 TM9SF3Q9HD45 589 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 SSU72Q9NP77 194 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 ACSS2Q9NR19 701 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 LATS2Q9NRM7 1088 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 OGFRQ9NZT2 677 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 GPR34Q9UPC5 381 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 SMG5Q9UPR3 1016 aaKnown RBP9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 CDYLQ9Y232 598 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 ANKRD6Q9Y2G4 727 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 ST14Q9Y5Y6 855 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 LRP4O75096 1905 aa9.56□□□□□ -0.88
SNRNP40-201ENST00000263694 PI4KAP42356 2102 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 TP53BP1Q12888 1972 aaPredicted RBP9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 A0A1W2PR77 199 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 PRSS38A1L453 326 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 KRT87PA6NCN2 255 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 TNFRSF10AO00220 468 aa9.55□□□□□ -0.88
SNRNP40-201ENST00000263694 PLIN3O60664 434 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms