RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 PHTF2Q8N3S3 785 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 ZNF276Q8N554 614 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 BPIFB6Q8NFQ5 453 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 INTS12Q96CB8 462 aaKnown RBP9.45□□□□□ -0.9
SIM1-201ENST00000262901 PPM1MQ96MI6 270 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 CIPCQ9C0C6 399 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 ZYG11BQ9C0D3 744 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 EVLQ9UI08 416 aaPredicted RBP9.45□□□□□ -0.9
SIM1-201ENST00000262901 DNMT3LQ9UJW3 386 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 MKL2Q9ULH7 1088 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 SCML2Q9UQR0 700 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 SCN1AP35498 2009 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 A0A0J9YYE9 177 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 SMIM31A0A1B0GVY4 71 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 MGAT4DA6NG13 374 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 RAD51BO15315 384 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 KRT6AP02538 564 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 KRT6BP04259 564 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 KRT8P05787 483 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 ZNF7P17097 686 aaPredicted RBP9.45□□□□□ -0.9
SIM1-201ENST00000262901 KRT6CP48668 564 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 GPR15P49685 360 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 IST1P53990 364 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 ACTR3P61158 418 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 ST8SIA6P61647 398 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 STARD3Q14849 445 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 TPGS1Q6ZTW0 290 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 CLYBLQ8N0X4 340 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 CSNK1G1Q9HCP0 422 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 TRNAU1APQ9NX07 287 aaKnown RBP9.45□□□□□ -0.9
SIM1-201ENST00000262901 INVSQ9Y283 1065 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 TMEM233B4DJY2 109 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 TYROBPO43914 113 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 PTPN2P17706 415 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 CTPS1P17812 591 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 NR4A1P22736 598 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 AIF1P55008 147 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 DSC2Q02487 901 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 RUNX1T1Q06455 604 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 CDK18Q07002 472 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 SHHQ15465 462 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 CPSF6Q16630 551 aaKnown RBP eCLIP9.45□□□□□ -0.9
SIM1-201ENST00000262901 HFE2Q6ZVN8 426 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 RBM23Q86U06 439 aaKnown RBP9.45□□□□□ -0.9
SIM1-201ENST00000262901 SATL1Q86VE3 508 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 CCDC103Q8IW40 242 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 ZCCHC7Q8N3Z6 543 aaKnown RBP9.45□□□□□ -0.9
SIM1-201ENST00000262901 MED8Q96G25 268 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 VPS35Q96QK1 796 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 FNIP2Q9P278 1114 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 NME7Q9Y5B8 376 aa9.45□□□□□ -0.9
SIM1-201ENST00000262901 ARHGEF15O94989 841 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 RPL38P63173 70 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 HTRA4P83105 476 aaPredicted RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 ITGADQ13349 1161 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 MRPL58Q14197 206 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 SMU1Q2TAY7 513 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 BRMS1LQ5PSV4 323 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 CD300LGQ6UXG3 332 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 ARHGAP36Q6ZRI8 547 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 FRMD7Q6ZUT3 714 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 TAC4Q86UU9 113 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 RALGPS2Q86X27 583 aaPredicted RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 CACUL1Q86Y37 369 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 GPR65Q8IYL9 337 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 ZMIZ2Q8NF64 920 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 RMND5AQ9H871 391 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 PIGVQ9NUD9 493 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 ARL15Q9NXU5 204 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 OPTCQ9UBM4 332 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 RPH3AQ9Y2J0 694 aaPredicted RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 PCDHB9Q9Y5E1 797 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 INSL5Q9Y5Q6 135 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 LINC01553A4QN01 128 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 GREM1O60565 184 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 IPO13O94829 963 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 GABRR2P28476 465 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 C21orf59P57076 290 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 KCNJ11Q14654 390 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 PERM1Q5SV97 790 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 HECTD2Q5U5R9 776 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 FAM45BPQ6NSW5 357 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 PRMT9Q6P2P2 845 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 RPS27LQ71UM5 84 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 CIR1Q86X95 450 aaPredicted RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 DENND1CQ8IV53 801 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 TET1Q8NFU7 2136 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 CLHC1Q8NHS4 586 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 FAM45AQ8TCE6 357 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 VPS33AQ96AX1 596 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 CLSTN3Q9BQT9 956 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 ASB8Q9H765 288 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 DAPK2Q9UIK4 370 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 FGF19O95750 216 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 CNPP09543 421 aaKnown RBP9.44□□□□□ -0.9
SIM1-201ENST00000262901 CKMT2P17540 419 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 S100A3P33764 101 aa9.44□□□□□ -0.9
SIM1-201ENST00000262901 PRKG2Q13237 762 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms