RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PPP1R8Q12972 351 aaKnown RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 NPTX1Q15818 432 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 GJC2Q5T442 439 aaPredicted RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 RSBN1Q5VWQ0 802 aaPredicted RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 GALNT7Q86SF2 657 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 LSM14AQ8ND56 463 aaKnown RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 NLGN2Q8NFZ4 835 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 SUN5Q8TC36 379 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 FIG4Q92562 907 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 LGALS12Q96DT0 336 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 SPATA17Q96L03 361 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 C17orf80Q9BSJ5 609 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 EMILIN2Q9BXX0 1053 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 SLC39A8Q9C0K1 460 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 RNF38Q9H0F5 515 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 MARCH7Q9H992 704 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 CARS2Q9HA77 564 aaKnown RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 OSGIN1Q9UJX0 560 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 PCDHGA10Q9Y5H3 936 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 SMIM28A0A1B0GU29 152 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 GOLGA8CPA6NN73 597 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 SUPT3HB4E1H0 165 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 KRT8P05787 483 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 ZNF286BP0CG31 522 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 WARSP23381 471 aaKnown RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 ARSDP51689 593 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 PRKG2Q13237 762 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 TTLL4Q14679 1199 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 CLCA4Q14CN2 919 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 SYT6Q5T7P8 510 aaPredicted RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 DESI1Q6ICB0 168 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 ENPP6Q6UWR7 440 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 ALKAL1Q6UXT8 129 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 FKBP9P1Q75LS8 142 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 ABI1Q8IZP0 508 aa14.79□□□□□ -0.04
XRCC1-201ENST00000262887 CRNNQ9UBG3 495 aaPredicted RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 PNMA8BQ9ULN7 279 aaPredicted RBP14.79□□□□□ -0.04
XRCC1-201ENST00000262887 ZNF236Q9UL36 1845 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 H0Y626 953 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 PRMT5O14744 637 aaPredicted RBP14.78□□□□□ -0.04
XRCC1-201ENST00000262887 SLC7A4O43246 635 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TRIM16O95361 564 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 PTTG1O95997 202 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 ZNF37AP17032 561 aaPredicted RBP14.78□□□□□ -0.04
XRCC1-201ENST00000262887 FDXRP22570 491 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 CD6P30203 668 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 IL18R1Q13478 541 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TUBA3EQ6PEY2 450 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 FBXO39Q8N4B4 442 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 FNDC5Q8NAU1 212 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 FRS2Q8WU20 508 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 ZHX1-C8orf76Q96EF9 292 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TMEM209Q96SK2 561 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 ATOH8Q96SQ7 321 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 OR2B2Q9GZK3 357 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 MFSD1Q9H3U5 465 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 SMPD4Q9NXE4 827 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 ZIM2Q9NZV7 527 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 SATB2Q9UPW6 733 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 RALGAPA2Q2PPJ7 1873 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TAF4O00268 1085 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 BCKDKO14874 412 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TEX28O15482 410 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 CCNKO75909 580 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 BMP1P13497 986 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 PRKACGP22612 351 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 CXCR2P25025 360 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 LILRA4P59901 499 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 ERVK-8P63133 956 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 KCTD2Q14681 263 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 ATP6AP1LQ52LC2 224 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 COLEC12Q5KU26 742 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 DLK2Q6UY11 383 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TAC4Q86UU9 113 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 ZFAND4Q86XD8 727 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 CCDC103Q8IW40 242 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 FAM20CQ8IXL6 584 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 SLC43A3Q8NBI5 491 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 RHEBL1Q8TAI7 183 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 PROKR1Q8TCW9 393 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 FBLIM1Q8WUP2 373 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 CHAC2Q8WUX2 184 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TP53INP1Q96A56 240 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 REXO5Q96IC2 774 aaKnown RBP14.78□□□□□ -0.04
XRCC1-201ENST00000262887 EGLN2Q96KS0 407 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TBC1D14Q9P2M4 693 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 LIMD1Q9UGP4 676 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 TPRKBQ9Y3C4 175 aa14.78□□□□□ -0.04
XRCC1-201ENST00000262887 GSTA4O15217 222 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 SLC16A6O15403 523 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 PRDX3P30048 256 aaKnown RBP14.77□□□□□ -0.04
XRCC1-201ENST00000262887 FMO3P31513 532 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 SOX4Q06945 474 aaPredicted RBP14.77□□□□□ -0.04
XRCC1-201ENST00000262887 NKG7Q16617 165 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 KIAA0319Q5VV43 1072 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 ANKS6Q68DC2 871 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 DLEU7Q6UYE1 221 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 PRR23BQ6ZRT6 265 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 LIMS2Q7Z4I7 341 aa14.77□□□□□ -0.04
XRCC1-201ENST00000262887 NECAB2Q7Z6G3 386 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms