RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 KIF19Q2TAC6 998 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 C6orf163Q5TEZ5 329 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 TPRG1Q6ZUI0 275 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 USP45Q70EL2 814 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 ST13P4Q8IZP2 240 aaPredicted RBP13.39□□□□□ -0.27
VMP1-201ENST00000262291 RBFAQ8N0V3 343 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 DLG3Q92796 817 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 SCRN2Q96FV2 425 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 SLC39A3Q9BRY0 314 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 IGFLR1Q9H665 355 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 IL1RL2Q9HB29 575 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 PCTPQ9UKL6 214 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
VMP1-201ENST00000262291 PSMD12O00232 456 aaPredicted RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 PLK4O00444 970 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 OR4F21O95013 312 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 CTSLP07711 333 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 HLA-EP13747 358 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 MAPK8P45983 427 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 RECQLP46063 649 aaPredicted RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 SLC6A11P48066 632 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 NRIP1P48552 1158 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 CSNK1DP48730 415 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 HSPA7P48741 367 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 ACTR3P61158 418 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 CDC16Q13042 620 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 LCP2Q13094 533 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 GPM6BQ13491 265 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 DHCR24Q15392 516 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 PLA2G4EQ3MJ16 856 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 GDPD4Q6W3E5 623 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 LARP4Q71RC2 724 aaKnown RBP eCLIP13.38□□□□□ -0.27
VMP1-201ENST00000262291 STK40Q8N2I9 435 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 NXPE1Q8N323 547 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 SKA2Q8WVK7 121 aaPredicted RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 FAR2Q96K12 515 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 DUS2Q9NX74 493 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 GMPR2Q9P2T1 348 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 POMPQ9Y244 141 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 SYCE1LA8MT33 242 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 RPS17P08708 135 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 PRDX6P30041 224 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 THOP1P52888 689 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 RPL26P61254 145 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 HPCAP84074 193 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 B4GALNT1Q00973 533 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 TRMT5Q32P41 509 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 HABP4Q5JVS0 413 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 GRAMD4Q6IC98 578 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 ELMSAN1Q6PJG2 1045 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 HSD11B1LQ7Z5J1 315 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 FBXW8Q8N3Y1 598 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 ARL10Q8N8L6 244 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 C1orf50Q9BV19 199 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 NOL11Q9H8H0 719 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 ELOVL2Q9NXB9 296 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 ZMYM5Q9UJ78 669 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 GNPTGQ9UJJ9 305 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 APPL1Q9UKG1 709 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 TMPRSS11EQ9UL52 423 aa13.38□□□□□ -0.27
VMP1-201ENST00000262291 RPL26L1Q9UNX3 145 aaKnown RBP13.38□□□□□ -0.27
VMP1-201ENST00000262291 FBP2O00757 339 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 CYP17A1P05093 508 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 XRCC1P18887 633 aaPredicted RBP13.37□□□□□ -0.27
VMP1-201ENST00000262291 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 SBSNQ6UWP8 590 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 CERS6Q6ZMG9 384 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 Q6ZVL8 140 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 BEND7Q8N7W2 519 aaPredicted RBP13.37□□□□□ -0.27
VMP1-201ENST00000262291 NUDT8Q8WV74 236 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 NXPE3Q969Y0 559 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 ECHDC3Q96DC8 303 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 MRGPRX3Q96LB0 322 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 EGFL8Q99944 293 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 TRIM8Q9BZR9 551 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 MCOLN1Q9GZU1 580 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 CIDEBQ9UHD4 219 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 POLG2Q9UHN1 485 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 SCN8AQ9UQD0 1980 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 RFXAPO00287 272 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 HGFP14210 728 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 ANPEPP15144 967 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 ETV3P41162 512 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 DIO3P55073 304 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 SLC44A4Q53GD3 710 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 KANK2Q63ZY3 851 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 DNAJC14Q6Y2X3 702 aaPredicted RBP13.37□□□□□ -0.27
VMP1-201ENST00000262291 CHSY3Q70JA7 882 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 LRCH3Q96II8 777 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 ADA2Q9NZK5 511 aa13.37□□□□□ -0.27
VMP1-201ENST00000262291 YBX2Q9Y2T7 364 aaKnown RBP13.37□□□□□ -0.27
VMP1-201ENST00000262291 BOLA2-SMG1P6H3BVE0 249 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 NR5A2O00482 541 aa13.36□□□□□ -0.27
VMP1-201ENST00000262291 E2F3O00716 465 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 304.5 ms